RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	SPICE1	Q8N0Z3	855 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	ANKLE1	Q8NAG6	615 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	REPS2	Q8NFH8	660 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	DCAF4	Q8WV16	495 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	ANKS1A	Q92625	1134 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	PAGR1	Q9BTK6	254 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	KRT23	Q9C075	422 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	PORCN	Q9H237	461 aa		11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	ZNF214	Q9UL59	606 aa	Predicted RBP	11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	DIS3	Q9Y2L1	958 aa	Known RBP	11.69	□□□□□ -0.54
KRIT1-223	ENST00000487168	RPTOR	Q8N122	1335 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	SGSM2	O43147	1006 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	RANBP6	O60518	1105 aa	Known RBP	11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	MSC	O60682	206 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	INHA	P05111	366 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	BMP3	P12645	472 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	CCL5	P13501	91 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	ZKSCAN1	P17029	563 aa	Predicted RBP	11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	EMP3	P54852	163 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	IRX6	P78412	446 aa	Predicted RBP	11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	FAM83B	Q5T0W9	1011 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	IQCA1	Q86XH1	822 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	MSL3	Q8N5Y2	521 aa	Known RBP	11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	SH3TC2	Q8TF17	1288 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	NBPF3	Q9H094	633 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	SLC38A10	Q9HBR0	1119 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	CWC22	Q9HCG8	908 aa	Known RBP	11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	IL17RB	Q9NRM6	502 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	FBXO40	Q9UH90	709 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	STX8	Q9UNK0	236 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	CEP290	O15078	2479 aa		11.68	□□□□□ -0.54
KRIT1-223	ENST00000487168	NEFL	P07196	543 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	FCER1A	P12319	257 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	STAT3	P40763	770 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	SLC1A4	P43007	532 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	CTDSPL2	Q05D32	466 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	TMEM132B	Q14DG7	1078 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	AMHR2	Q16671	573 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	TKFC	Q3LXA3	575 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	SLFN13	Q68D06	897 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	BTNL9	Q6UXG8	535 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	ATG4C	Q96DT6	458 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	MTA3	Q9BTC8	594 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	FAM117A	Q9C073	453 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	RNF208	Q9H0X6	261 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	HMX1	Q9NP08	348 aa	Predicted RBP	11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	BIN2	Q9UBW5	565 aa	Predicted RBP	11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	DNAH12	Q6ZR08	3092 aa		11.67	□□□□□ -0.54
KRIT1-223	ENST00000487168	ZBED4	O75132	1171 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	SNHG28	P0DPA3	235 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	ERCC3	P19447	782 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	FAM47A	Q5JRC9	791 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	GPATCH4	Q5T3I0	446 aa	Known RBP	11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	MFSD14C	Q5VZR4	134 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	UBE2Q1	Q7Z7E8	422 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	TBC1D10C	Q8IV04	446 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	CHST13	Q8NET6	341 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	TRIB2	Q92519	343 aa		11.66	□□□□□ -0.54
KRIT1-223	ENST00000487168	LOC102724159	A0A0B4J2E5	919 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	SGPL1	O95470	568 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	ELN	P15502	786 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	ADORA2A	P29274	412 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	TRDN	Q13061	729 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	HIC1	Q14526	733 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	KCTD2	Q14681	263 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	PWP2	Q15269	919 aa	Known RBP	11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	CASC1	Q6TDU7	716 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	LRRC47	Q8N1G4	583 aa	Known RBP	11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	U2AF1L4	Q8WU68	220 aa	Known RBP	11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	MAP4K1	Q92918	833 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	FBXO28	Q9NVF7	368 aa		11.65	□□□□□ -0.54
KRIT1-223	ENST00000487168	COL11A1	P12107	1806 aa	Predicted RBP	11.65	□□□□□ -0.55
KRIT1-223	ENST00000487168	CENPB	P07199	599 aa	Predicted RBP	11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	MTFR1	Q15390	333 aa		11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	DPP9	Q86TI2	863 aa		11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	CCDC136	Q96JN2	1154 aa		11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	TMEM47	Q9BQJ4	181 aa		11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	UNC93B1	Q9H1C4	597 aa		11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	RANBP2	P49792	3224 aa	Known RBP	11.64	□□□□□ -0.55
KRIT1-223	ENST00000487168	PFAS	O15067	1338 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	NEDD4	P46934	1319 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	WDR19	Q8NEZ3	1342 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	SYNGAP1	Q96PV0	1343 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	DNAJC25-GNG10	A0A024R161	153 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	TMEM232	C9JQI7	657 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	EPB41L2	O43491	1005 aa	Known RBP	11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	PDHB	P11177	359 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	CYP2B6	P20813	491 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	HAND2	P61296	217 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	PLS1	Q14651	629 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	SART3	Q15020	963 aa	Known RBP	11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	ASPRV1	Q53RT3	343 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	SNRNP48	Q6IEG0	339 aa	Known RBP	11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	KIAA1211	Q6ZU35	1233 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	NCAPG2	Q86XI2	1143 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	STK11IP	Q8N1F8	1099 aa		11.63	□□□□□ -0.55
KRIT1-223	ENST00000487168	SHISA4	Q96DD7	197 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms