RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ARMCX2Q7L311 632 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
PDPN-205ENST00000487038 REPS2Q8NFH8 660 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 SSH3Q8TE77 659 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 ATP8A2Q9NTI2 1148 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 ZDBF2Q9HCK1 2354 aa9.21□□□□□ -0.94
PDPN-205ENST00000487038 WDFY4Q6ZS81 3184 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 PRR33A8MZF0 331 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 KIF28PB7ZC32 967 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 ATP2A1O14983 1001 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 ADCY6O43306 1168 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 TLL1O43897 1013 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 ZBED4O75132 1171 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 TRIM27P14373 513 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 MYOGP15173 224 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 PDE6AP16499 860 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 SLC4A3P48751 1232 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 NKX3-2P78367 333 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 TNFAIP2Q03169 654 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 EVX2Q03828 476 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 CXCL17Q6UXB2 119 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDPN-205ENST00000487038 TLK2Q86UE8 772 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 ERC1Q8IUD2 1116 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 SIAH1Q8IUQ4 282 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 TRMT2AQ8IZ69 625 aaKnown RBP9.2□□□□□ -0.94
PDPN-205ENST00000487038 LCORLQ8N3X6 602 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 PRPF38AQ8NAV1 312 aaKnown RBP9.2□□□□□ -0.94
PDPN-205ENST00000487038 SLC43A3Q8NBI5 491 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 CHST13Q8NET6 341 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 EAF2Q96CJ1 260 aaPredicted RBP9.2□□□□□ -0.94
PDPN-205ENST00000487038 DYNLL2Q96FJ2 89 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 NOC4LQ9BVI4 516 aaKnown RBP9.2□□□□□ -0.94
PDPN-205ENST00000487038 AP5M1Q9H0R1 490 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 WNT8AQ9H1J5 351 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 LCTP09848 1927 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 SPTBN4Q9H254 2564 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 UMODL1Q5DID0 1318 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 ZNF532Q9HCE3 1301 aa9.2□□□□□ -0.94
PDPN-205ENST00000487038 FAM86C2PA6NEL3 165 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 PI4K2BG5E9Z4 385 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 SMIM22K7EJ46 135 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 B4GALT4O60513 344 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 SUPT20HL2P0C7V6 817 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 CYP2D6P10635 497 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 RFC2P35250 354 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 CDK8P49336 464 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 OAZ1P54368 228 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
PDPN-205ENST00000487038 ATP8B2P98198 1209 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 BEX3Q00994 111 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 FSCN1Q16658 493 aaKnown RBP9.19□□□□□ -0.94
PDPN-205ENST00000487038 CSPP1Q1MSJ5 1256 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 C16orf86Q6ZW13 317 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 AACSQ86V21 672 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 CPXCR1Q8N123 301 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 PHOSPHO2Q8TCD6 241 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 ARNTL2Q8WYA1 636 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 FRAT1Q92837 279 aaPredicted RBP9.19□□□□□ -0.94
PDPN-205ENST00000487038 SCLYQ96I15 445 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 CERS4Q9HA82 394 aa9.19□□□□□ -0.94
PDPN-205ENST00000487038 NOP58Q9Y2X3 529 aaKnown RBP9.19□□□□□ -0.94
PDPN-205ENST00000487038 ASB14A6NK59 587 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 TRIOO75962 3097 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 C12orf60Q5U649 245 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 ZNF318Q5VUA4 2279 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 NLRC5Q86WI3 1866 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 DNAJC2Q99543 621 aaKnown RBP9.18□□□□□ -0.94
PDPN-205ENST00000487038 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDPN-205ENST00000487038 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 ARMT1Q9H993 441 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 C11orf16Q9NQ32 467 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 ARPP21Q9UBL0 812 aaPredicted RBP9.18□□□□□ -0.94
PDPN-205ENST00000487038 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
PDPN-205ENST00000487038 ZNF536O15090 1300 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 TCRBV5S4A2TA0A5A2 114 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 RFXAPO00287 272 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 GOLIM4O00461 696 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 CTAGE5O15320 804 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 BCAR3O75815 825 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 FDX1P10109 184 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 ALADP13716 330 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 KCNJ6P48051 423 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 MRE11P49959 708 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 TTLL4Q14679 1199 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 DEFB128Q7Z7B8 93 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDPN-205ENST00000487038 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 KATNBL1Q9H079 304 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 TRPV6Q9H1D0 765 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 RAVER2Q9HCJ3 691 aaKnown RBP9.17□□□□□ -0.94
PDPN-205ENST00000487038 POLR3EQ9NVU0 708 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
PDPN-205ENST00000487038 GNEQ9Y223 722 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms