RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 VGLL4Q14135 290 aa7.24□□□□□ -1.25
FAM228B-204ENST00000486967 NBPF12Q5TAG4 269 aaPredicted RBP7.24□□□□□ -1.25
FAM228B-204ENST00000486967 ANKRD23Q86SG2 305 aa7.24□□□□□ -1.25
FAM228B-204ENST00000486967 TRIM50Q86XT4 487 aa7.24□□□□□ -1.25
FAM228B-204ENST00000486967 PBXIP1Q96AQ6 731 aa7.24□□□□□ -1.25
FAM228B-204ENST00000486967 PDLIM7Q9NR12 457 aa7.24□□□□□ -1.25
FAM228B-204ENST00000486967 PTPN13Q12923 2485 aa7.24□□□□□ -1.25
FAM228B-204ENST00000486967 SERTM1A2A2V5 107 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 TRIM43BA6NCK2 446 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 PDHXO00330 501 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 EML1O00423 815 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 PIP4K2AP48426 406 aaPredicted RBP7.23□□□□□ -1.25
FAM228B-204ENST00000486967 MMP14P50281 582 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 DMWDQ09019 674 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 GRAPQ13588 217 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 MAP3K21Q5TCX8 1036 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 SLC9A9Q8IVB4 645 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 GRAPLQ8TC17 118 aaPredicted RBP7.23□□□□□ -1.25
FAM228B-204ENST00000486967 RHPN1Q8TCX5 695 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 ZDHHC1Q8WTX9 485 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 TRIM43Q96BQ3 446 aaPredicted RBP7.23□□□□□ -1.25
FAM228B-204ENST00000486967 COA7Q96BR5 231 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 ZC3H12CQ9C0D7 883 aaKnown RBP7.23□□□□□ -1.25
FAM228B-204ENST00000486967 NKX2-4Q9H2Z4 354 aa7.23□□□□□ -1.25
FAM228B-204ENST00000486967 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 M0R082 166 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 RNMTO43148 476 aaKnown RBP7.22□□□□□ -1.25
FAM228B-204ENST00000486967 KRT38O76015 456 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 IL9P15248 144 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 FPGSQ05932 587 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 EIF4A2Q14240 407 aaKnown RBP7.22□□□□□ -1.25
FAM228B-204ENST00000486967 MCTP2Q6DN12 878 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 FBXL6Q8N531 539 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ZNF417Q8TAU3 575 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ZBED3Q96IU2 234 aaPredicted RBP7.22□□□□□ -1.25
FAM228B-204ENST00000486967 NACC1Q96RE7 527 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ZNF587Q96SQ5 575 aaPredicted RBP7.22□□□□□ -1.25
FAM228B-204ENST00000486967 PARK7Q99497 189 aaKnown RBP7.22□□□□□ -1.25
FAM228B-204ENST00000486967 HNRNPABQ99729 332 aaKnown RBP7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ALG2Q9H553 416 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ANKIB1Q9P2G1 1089 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 COG6Q9Y2V7 657 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 CSADQ9Y600 493 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ZNF804BA4D1E1 1349 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 COL4A1P02462 1669 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 FRYLO94915 3013 aa7.22□□□□□ -1.25
FAM228B-204ENST00000486967 ANKRD36CQ5JPF3 1778 aa7.21□□□□□ -1.25
FAM228B-204ENST00000486967 TMEM221A6NGB7 291 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 USP17L5A8MUK1 530 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 M0R296 226 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 NTSR2O95665 410 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 TRIM28Q13263 835 aaKnown RBP7.21□□□□□ -1.26
FAM228B-204ENST00000486967 LEXMQ3ZCV2 418 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 ZMYM1Q5SVZ6 1142 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 SUSD4Q5VX71 490 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 DDX46Q7L014 1031 aaKnown RBP7.21□□□□□ -1.26
FAM228B-204ENST00000486967 UPF3BQ9BZI7 483 aaKnown RBP7.21□□□□□ -1.26
FAM228B-204ENST00000486967 UBN2Q6ZU65 1347 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 RLFQ13129 1914 aa7.21□□□□□ -1.26
FAM228B-204ENST00000486967 CEMIPQ8WUJ3 1361 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 ADRB1P08588 477 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 ATP1A2P50993 1020 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 EPHA4P54764 986 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 GPSM2P81274 684 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 SPEM2Q0P670 501 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 HERC4Q5GLZ8 1057 aaPredicted RBP7.2□□□□□ -1.26
FAM228B-204ENST00000486967 TBCELQ5QJ74 424 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 KIAA0319Q5VV43 1072 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 ERO1BQ86YB8 467 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 DEPDC4Q8N2C3 294 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.2□□□□□ -1.26
FAM228B-204ENST00000486967 TBC1D16Q8TBP0 767 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 EDAQ92838 391 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 TNFRSF25Q93038 417 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 ANKRD17O75179 2603 aaKnown RBP7.2□□□□□ -1.26
FAM228B-204ENST00000486967 FRMPD3Q5JV73 1810 aa7.2□□□□□ -1.26
FAM228B-204ENST00000486967 GBF1Q92538 1859 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 RAD21O60216 631 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 ADH7P40394 386 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 VCPP55072 806 aaKnown RBP7.19□□□□□ -1.26
FAM228B-204ENST00000486967 PSMA6P60900 246 aaKnown RBP7.19□□□□□ -1.26
FAM228B-204ENST00000486967 SFSWAPQ12872 951 aaKnown RBP7.19□□□□□ -1.26
FAM228B-204ENST00000486967 PPIL2Q13356 520 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 SLC10A5Q5PT55 438 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 C1orf53Q5VUE5 145 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 KRT40Q6A162 431 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 FRMD5Q7Z6J6 570 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 KIAA2013Q8IYS2 634 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.19□□□□□ -1.26
FAM228B-204ENST00000486967 TPCN2Q8NHX9 752 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 MDFIQ99750 246 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.19□□□□□ -1.26
FAM228B-204ENST00000486967 YBX2Q9Y2T7 364 aaKnown RBP7.19□□□□□ -1.26
FAM228B-204ENST00000486967 NUP98P52948 1817 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 MYO3BQ8WXR4 1341 aa7.19□□□□□ -1.26
FAM228B-204ENST00000486967 AK9Q5TCS8 1911 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms