RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CDHR2Q9BYE9 1310 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 STK36Q9NRP7 1315 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 ZNF263O14978 683 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 PPFIA4O75335 1185 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 PRPF6O94906 941 aaKnown RBP13.84□□□□□ -0.19
HSPG2-211ENST00000486901 IRAK1P51617 712 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 LRRC41Q15345 812 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 NPY5RQ15761 445 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 GJA10Q969M2 543 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 H0YHG0 523 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 KRT86O43790 486 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.194e-6■■■■□ 24.3
HSPG2-211ENST00000486901 KLRK1P26718 216 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 HPDP32754 393 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-211ENST00000486901 ASIC1P78348 528 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 STK4Q13043 487 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
HSPG2-211ENST00000486901 RNF26Q9BY78 433 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-211ENST00000486901 FAM169AQ9Y6X4 670 aa13.84□□□□□ -0.19
HSPG2-211ENST00000486901 PDE8AO60658 829 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 CORO7P57737 925 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 PDE4DQ08499 809 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 KIF5AQ12840 1032 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 SEC23AQ15436 765 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 ZNF658Q5TYW1 1059 aaPredicted RBP13.83□□□□□ -0.19
HSPG2-211ENST00000486901 RUFY1Q96T51 708 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 HAUS4Q9H6D7 363 aa13.83□□□□□ -0.19
HSPG2-211ENST00000486901 MYO1FO00160 1098 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 AKR1B10O60218 316 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-211ENST00000486901 RNF187Q5TA31 235 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-211ENST00000486901 CCNI2Q6ZMN8 369 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-211ENST00000486901 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-211ENST00000486901 DYNLL2Q96FJ2 89 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 TBC1D7Q9P0N9 293 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 ABCC12Q96J65 1359 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 GTPBP6O43824 516 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-211ENST00000486901 SEC24CP53992 1094 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 TROAPQ12815 778 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 LETM2Q2VYF4 491 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
HSPG2-211ENST00000486901 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 MED4Q9NPJ6 270 aa13.83□□□□□ -0.2
HSPG2-211ENST00000486901 EBAG9O00559 213 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 ERLIN2O94905 339 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
HSPG2-211ENST00000486901 RASSF7Q02833 373 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 SECISBP2LQ93073 1101 aaKnown RBP13.82□□□□□ -0.2
HSPG2-211ENST00000486901 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
HSPG2-211ENST00000486901 CAPS2Q9BXY5 557 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 RNF41Q9H4P4 317 aaPredicted RBP13.82□□□□□ -0.2
HSPG2-211ENST00000486901 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 MYH10P35580 1976 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 CHRNDQ07001 517 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 SPA17Q15506 151 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 RRAGAQ7L523 313 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 SALL4Q9UJQ4 1053 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 RAD21O60216 631 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 FTCDO95954 541 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 FAM153BP0C7A2 387 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 FUT2Q10981 343 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 FAM153CQ494X1 144 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 GLIS3Q8NEA6 775 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 PPM1EQ8WY54 764 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
HSPG2-211ENST00000486901 BCCIPQ9P287 314 aaKnown RBP eCLIP13.82□□□□□ -0.2
HSPG2-211ENST00000486901 FAM153AQ9UHL3 310 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 NFU1Q9UMS0 254 aa13.82□□□□□ -0.2
HSPG2-211ENST00000486901 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 C4BP0C0L5 1744 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 CCDC194A0A1B0GVG4 234 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 RASSF10A6NK89 507 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 GFPT1Q06210 699 aaPredicted RBP13.81□□□□□ -0.2
HSPG2-211ENST00000486901 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 CAPN7Q9Y6W3 813 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 SCG2P13521 617 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
HSPG2-211ENST00000486901 TECP42680 631 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 NAALADL2Q58DX5 795 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
HSPG2-211ENST00000486901 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 PSMA7O14818 248 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
HSPG2-211ENST00000486901 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
HSPG2-211ENST00000486901 MST1RQ04912 1400 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 CYLC1P35663 651 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms