RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 GRIN2CQ14957 1233 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 CCDC144BQ3MJ40 725 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 GMCL1P1Q8NEA9 526 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 VTI1AQ96AJ9 217 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 CEP95Q96GE4 821 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 FGD4Q96M96 766 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.422e-25■■■□□ 17.4
PHF1-208ENST00000486845 EPB41L4AQ9HCS5 686 aaPredicted RBP23.91■■□□□ 1.42
PHF1-208ENST00000486845 MTMR4Q9NYA4 1195 aa23.91■■□□□ 1.42
PHF1-208ENST00000486845 GPAA1O43292 621 aa23.9■■□□□ 1.42
PHF1-208ENST00000486845 TTLL1O95922 423 aa23.9■■□□□ 1.42
PHF1-208ENST00000486845 ARMCX2Q7L311 632 aa23.9■■□□□ 1.42
PHF1-208ENST00000486845 TIFAQ96CG3 184 aa23.9■■□□□ 1.42
PHF1-208ENST00000486845 ZNF576Q9H609 170 aa23.9■■□□□ 1.42
PHF1-208ENST00000486845 TTC28Q96AY4 2481 aa23.89■■□□□ 1.42
PHF1-208ENST00000486845 ARVCFO00192 962 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 TLR3O15455 904 aaKnown RBP23.89■■□□□ 1.41
PHF1-208ENST00000486845 ADCY6O43306 1168 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 PRDM1O75626 825 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 APPP05067 770 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 FDX1P10109 184 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 GNASQ5JWF2 1037 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 TMEM199Q8N511 208 aa23.89■■□□□ 1.41
PHF1-208ENST00000486845 BMP3P12645 472 aa23.88■■□□□ 1.41
PHF1-208ENST00000486845 IRX5P78411 483 aaPredicted RBP23.88■■□□□ 1.41
PHF1-208ENST00000486845 LRRC47Q8N1G4 583 aaKnown RBP23.88■■□□□ 1.41
PHF1-208ENST00000486845 PLIN4Q96Q06 1357 aa23.88■■□□□ 1.41
PHF1-208ENST00000486845 LRRFIP1Q32MZ4 808 aaKnown RBP23.87■■□□□ 1.41
PHF1-208ENST00000486845 TMEM240Q5SV17 173 aa23.87■■□□□ 1.41
PHF1-208ENST00000486845 SLFN13Q68D06 897 aa23.87■■□□□ 1.41
PHF1-208ENST00000486845 PSRC1Q6PGN9 363 aaPredicted RBP23.87■■□□□ 1.41
PHF1-208ENST00000486845 CCDC144CPQ8IYA2 1237 aa23.87■■□□□ 1.41
PHF1-208ENST00000486845 ACAD9Q9H845 621 aa23.87■■□□□ 1.41
PHF1-208ENST00000486845 HOMER2Q9NSB8 354 aa23.87■■□□□ 1.41
PHF1-208ENST00000486845 RCAN3Q9UKA8 241 aa23.87■■□□□ 1.41
PHF1-208ENST00000486845 SPTBN5Q9NRC6 3674 aaKnown RBP23.87■■□□□ 1.41
PHF1-208ENST00000486845 TSPY3P0CV98 308 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 TSPY8P0CW00 308 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 CSF2RAP15509 400 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 NKX3-2P78367 333 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 C16orf59Q7L2K0 433 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 FAM126BQ8IXS8 530 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 NEDD1Q8NHV4 660 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 NACAP1Q9BZK3 213 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 KATNBL1Q9H079 304 aa23.86■■□□□ 1.41
PHF1-208ENST00000486845 ISY1Q9ULR0 285 aaKnown RBP23.86■■□□□ 1.41
PHF1-208ENST00000486845 PATL2C9JE40 543 aaKnown RBP23.85■■□□□ 1.41
PHF1-208ENST00000486845 M0R2C6 588 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 CNTN2Q02246 1040 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 PDE4BQ07343 736 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 RASIP1Q5U651 963 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 CCDC129Q6ZRS4 1044 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 IFNL3Q8IZI9 196 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 FAM133AQ8N9E0 248 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 PPP1R12CQ9BZL4 782 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 PRDM6Q9NQX0 595 aa23.85■■□□□ 1.41
PHF1-208ENST00000486845 TMEM232C9JQI7 657 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 CTAGE5O15320 804 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
PHF1-208ENST00000486845 STAT2P52630 851 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 TNFAIP2Q03169 654 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 TJAP1Q5JTD0 557 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 TSHZ3Q63HK5 1081 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 NOL8Q76FK4 1167 aaKnown RBP23.84■■□□□ 1.41
PHF1-208ENST00000486845 FAM160B2Q86V87 743 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 USP38Q8NB14 1042 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 CHURC1Q8WUH1 139 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 GAS2L1Q99501 681 aaPredicted RBP23.84■■□□□ 1.41
PHF1-208ENST00000486845 PBX4Q9BYU1 374 aa23.84■■□□□ 1.41
PHF1-208ENST00000486845 ASB14A6NK59 587 aa23.83■■□□□ 1.41
PHF1-208ENST00000486845 IKQ13123 557 aaPredicted RBP23.83■■□□□ 1.41
PHF1-208ENST00000486845 TKFCQ3LXA3 575 aa23.83■■□□□ 1.41
PHF1-208ENST00000486845 ZNF365Q70YC5 407 aa23.83■■□□□ 1.41
PHF1-208ENST00000486845 GMCL1Q96IK5 515 aa23.83■■□□□ 1.41
PHF1-208ENST00000486845 DCTPP1Q9H773 170 aa23.83■■□□□ 1.41
PHF1-208ENST00000486845 A1CFQ9NQ94 594 aaKnown RBP23.83■■□□□ 1.41
PHF1-208ENST00000486845 RNF146Q9NTX7 359 aa23.83■■□□□ 1.41
PHF1-208ENST00000486845 CABYRO75952 493 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 CD4P01730 458 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 ACRP10323 421 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 BEX3Q00994 111 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 C20orf194Q5TEA3 1177 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 DIEXFQ68CQ4 756 aaKnown RBP23.82■■□□□ 1.4
PHF1-208ENST00000486845 STAG1Q8WVM7 1258 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 MTIF3Q9H2K0 278 aaKnown RBP23.82■■□□□ 1.4
PHF1-208ENST00000486845 IL23AQ9NPF7 189 aa23.82■■□□□ 1.4
PHF1-208ENST00000486845 GRXCR1A8MXD5 290 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 PBX2P40425 430 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 SLC1A4P43007 532 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 TFAP4Q01664 338 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 TLK2Q86UE8 772 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 SLC43A3Q8NBI5 491 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 AGBL1Q96MI9 1066 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 AP5M1Q9H0R1 490 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 NAPBQ9H115 298 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 ZNF536O15090 1300 aa23.81■■□□□ 1.4
PHF1-208ENST00000486845 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.8■■□□□ 1.4
PHF1-208ENST00000486845 SOWAHBA6NEL2 793 aa23.8■■□□□ 1.4
PHF1-208ENST00000486845 LRRC37A2A6NM11 1700 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms