RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 hCG_1984214I3L0E3 225 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 ICAM1P05362 532 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 HSP90AA1P07900 732 aaKnown RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 HSPA6P17066 643 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 OSBPP22059 807 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 TM4SF4P48230 202 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 OAZ1P54368 228 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 SNAP25P60880 206 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 KIF23Q02241 960 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 IFNL1Q8IU54 200 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 ZNF713Q8N859 430 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 GTF3C2Q8WUA4 911 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 WASF1Q92558 559 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 PARK7Q99497 189 aaKnown RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 P2RX7Q99572 595 aaKnown RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 VAT1LQ9HCJ6 419 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 BARHL2Q9NY43 387 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 HOXC10Q9NYD6 342 aa11.07□□□□□ -0.64
MCF2L-227ENST00000486806 ZNF214Q9UL59 606 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 WDR33Q9C0J8 1336 aaKnown RBP11.07□□□□□ -0.64
MCF2L-227ENST00000486806 STXBP3O00186 592 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 AOC2O75106 756 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 CNMDO75829 334 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 CYP2C8P10632 490 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 VEGFBP49765 207 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 AKAP17AQ02040 695 aaKnown RBP11.06□□□□□ -0.64
MCF2L-227ENST00000486806 GRM1Q13255 1194 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 TMEM132BQ14DG7 1078 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-227ENST00000486806 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-227ENST00000486806 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.64
MCF2L-227ENST00000486806 ALG1Q9BT22 464 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 CWC22Q9HCG8 908 aaKnown RBP11.06□□□□□ -0.64
MCF2L-227ENST00000486806 KIF3AQ9Y496 699 aa11.06□□□□□ -0.64
MCF2L-227ENST00000486806 ZBED4O75132 1171 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 TAL1P17542 331 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-227ENST00000486806 MAP2K2P36507 400 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 NPY5RQ15761 445 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 CCDC174Q6PII3 467 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-227ENST00000486806 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 AMNQ9BXJ7 453 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 RAVER2Q9HCJ3 691 aaKnown RBP11.05□□□□□ -0.64
MCF2L-227ENST00000486806 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 SH3GLB2Q9NR46 395 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 VPS54Q9P1Q0 977 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 BTBD7Q9P203 1132 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
MCF2L-227ENST00000486806 ESYT2A0FGR8 921 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 OPLAHO14841 1288 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 PDCP20941 246 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 SYT1P21579 422 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 GCLCP48506 637 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-227ENST00000486806 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 FBXO18Q8NFZ0 1043 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 SMCR8Q8TEV9 937 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-227ENST00000486806 COA7Q96BR5 231 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 C8orf76Q96K31 380 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 AGBL1Q96MI9 1066 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 PHF20Q9BVI0 1012 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 GJB4Q9NTQ9 266 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 RBPJLQ9UBG7 517 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 MORF4L1Q9UBU8 362 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 CCPG1Q9ULG6 757 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 RABGAP1Q9Y3P9 1069 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 PCDHA1Q9Y5I3 950 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 ABCB11O95342 1321 aa11.04□□□□□ -0.64
MCF2L-227ENST00000486806 PEX10O60683 326 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 ALDH1A1P00352 501 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 MMP1P03956 469 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 BCRP11274 1271 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 NAPAP54920 295 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 ERVK-9P63128 1117 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 ERVK-24P63145 666 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 GHRHRQ02643 423 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 TRAF1Q13077 416 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 TAF1CQ15572 869 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-227ENST00000486806 FAM110CQ1W6H9 321 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 USH1GQ495M9 461 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 KRT40Q6A162 431 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 SNRNP48Q6IEG0 339 aaKnown RBP11.03□□□□□ -0.64
MCF2L-227ENST00000486806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
MCF2L-227ENST00000486806 DAGLBQ8NCG7 672 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-227ENST00000486806 CLEC4DQ8WXI8 215 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 CFHR5Q9BXR6 569 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 SPATC1LQ9H0A9 340 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 ZMYND12Q9H0C1 365 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms