RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CTSKP43235 329 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 TMEM62Q0P6H9 643 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 INTS3Q68E01 1043 aaKnown RBP7.2□□□□□ -1.26
SMC4-218ENST00000486711 SLCO6A1Q86UG4 719 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 DSCC1Q9BVC3 393 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 TGIF2Q9GZN2 237 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 ZCCHC4Q9H5U6 513 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 PARD6AQ9NPB6 346 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 ZNRF3Q9ULT6 936 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 NCANO14594 1321 aa7.2□□□□□ -1.26
SMC4-218ENST00000486711 PRRG2O14669 202 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 N4BP3O15049 544 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 GSNP06396 782 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 VAV1P15498 845 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 BMP7P18075 431 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 SDHBP21912 280 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 CRTC3Q6UUV7 619 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 USP48Q86UV5 1035 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 CCDC144CPQ8IYA2 1237 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 C7orf61Q8IZ16 206 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 SMARCC1Q92922 1105 aaPredicted RBP7.19□□□□□ -1.26
SMC4-218ENST00000486711 CNTD2Q9H8S5 307 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 USP35Q9P2H5 1018 aa7.19□□□□□ -1.26
SMC4-218ENST00000486711 EPHB3P54753 998 aa7.18□□□□□ -1.26
SMC4-218ENST00000486711 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
SMC4-218ENST00000486711 NAALADL2Q58DX5 795 aa7.18□□□□□ -1.26
SMC4-218ENST00000486711 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
SMC4-218ENST00000486711 TAB3Q8N5C8 712 aaPredicted RBP7.18□□□□□ -1.26
SMC4-218ENST00000486711 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
SMC4-218ENST00000486711 ACSL6Q9UKU0 697 aa7.18□□□□□ -1.26
SMC4-218ENST00000486711 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.18□□□□□ -1.26
SMC4-218ENST00000486711 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 FAM86C2PA6NEL3 165 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 ACRP10323 421 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 PRKCAP17252 672 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 PMS1P54277 932 aaKnown RBP7.17□□□□□ -1.26
SMC4-218ENST00000486711 CYP4F8P98187 520 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 CWF19L1Q69YN2 538 aaKnown RBP7.17□□□□□ -1.26
SMC4-218ENST00000486711 NUP43Q8NFH3 380 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 KCNC2Q96PR1 638 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 TM9SF2Q99805 663 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 KLHL14Q9P2G3 628 aa7.17□□□□□ -1.26
SMC4-218ENST00000486711 C9IYK1 514 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 IRS4O14654 1257 aaPredicted RBP7.16□□□□□ -1.26
SMC4-218ENST00000486711 CDR1P51861 262 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 RAB3GAP1Q15042 981 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 ZNF394Q53GI3 561 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 NAT16Q8N8M0 369 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 MZB1Q8WU39 189 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 FERD3LQ96RJ6 166 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 TNFRSF12AQ9NP84 129 aa7.16□□□□□ -1.26
SMC4-218ENST00000486711 SHOXO15266 292 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 CEBPAP49715 358 aaPredicted RBP7.15□□□□□ -1.26
SMC4-218ENST00000486711 AFF3P51826 1226 aaKnown RBP7.15□□□□□ -1.26
SMC4-218ENST00000486711 SF3A1Q15459 793 aaKnown RBP7.15□□□□□ -1.26
SMC4-218ENST00000486711 RTP2Q5QGT7 225 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 TMC6Q7Z403 805 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 MARCH10Q8NA82 808 aaPredicted RBP7.15□□□□□ -1.26
SMC4-218ENST00000486711 DACT3Q96B18 629 aaPredicted RBP7.15□□□□□ -1.26
SMC4-218ENST00000486711 C20orf173Q96LM9 149 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 JMJD8Q96S16 334 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 CAPN10Q9HC96 672 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 IMPACTQ9P2X3 320 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 PCDHGB7Q9Y5F8 929 aa7.15□□□□□ -1.26
SMC4-218ENST00000486711 NUDT19A8MXV4 375 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 TRIM13O60858 407 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 GSTM1P09488 218 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 NOL9Q5SY16 702 aaKnown RBP7.14□□□□□ -1.27
SMC4-218ENST00000486711 TDRD10Q5VZ19 366 aaKnown RBP7.14□□□□□ -1.27
SMC4-218ENST00000486711 HLA-DQA1Q5Y7H0 255 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 PANK1Q8TE04 598 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 SREK1Q8WXA9 508 aaKnown RBP7.14□□□□□ -1.27
SMC4-218ENST00000486711 SLC12A9Q9BXP2 914 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 ACBD3Q9H3P7 528 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 DDX41Q9UJV9 622 aaKnown RBP7.14□□□□□ -1.27
SMC4-218ENST00000486711 INPP5FQ9Y2H2 1132 aa7.14□□□□□ -1.27
SMC4-218ENST00000486711 A0A1W2PQ27 194 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 A0A1W2PQ64 194 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 A0A1W2PQC6 194 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 A0A1W2PQD8 194 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 CBX2Q14781 532 aaPredicted RBP7.13□□□□□ -1.27
SMC4-218ENST00000486711 NR1I3Q14994 352 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 CNKSR3Q6P9H4 555 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 CYP2R1Q6VVX0 501 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 PPFIBP1Q86W92 1011 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 LDHDQ86WU2 507 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 RBBP8NLQ8NC74 664 aaPredicted RBP7.13□□□□□ -1.27
SMC4-218ENST00000486711 TMEM52Q8NDY8 209 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 RELTQ969Z4 430 aa7.13□□□□□ -1.27
SMC4-218ENST00000486711 SRRTQ9BXP5 876 aaKnown RBP7.13□□□□□ -1.27
SMC4-218ENST00000486711 H0Y8X5 98 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 SASH1O94885 1247 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 GUCY2CP25092 1073 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 NOP2P46087 812 aaKnown RBP7.12□□□□□ -1.27
SMC4-218ENST00000486711 RACK1P63244 317 aaKnown RBP7.12□□□□□ -1.27
SMC4-218ENST00000486711 FBXW10Q5XX13 1052 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 DCAF15Q66K64 600 aa7.12□□□□□ -1.27
SMC4-218ENST00000486711 RPTNQ6XPR3 784 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms