RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 HMGCS2P54868 508 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-207ENST00000486080 CHURC1Q8WUH1 139 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 POLR3EQ9NVU0 708 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 FEM1BQ9UK73 627 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 AFG3L2Q9Y4W6 797 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 CSADQ9Y600 493 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 PTPRFP10586 1907 aa16.55■□□□□ 0.24
COL9A1-207ENST00000486080 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
COL9A1-207ENST00000486080 PLA2G6O60733 806 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 ATP2B1P20020 1258 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 NASPP49321 788 aaPredicted RBP16.54■□□□□ 0.24
COL9A1-207ENST00000486080 USP14P54578 494 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 SF3A1Q15459 793 aaKnown RBP16.54■□□□□ 0.24
COL9A1-207ENST00000486080 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
COL9A1-207ENST00000486080 GALNT17Q6IS24 598 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 LINC00301Q8NCQ3 95 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 ELP3Q9H9T3 547 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 C6orf50Q9HD87 102 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 PCDHA1Q9Y5I3 950 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 PARP14Q460N5 1801 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 ESYT2A0FGR8 921 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 WNT7AO00755 349 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 UBE2HP62256 183 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 STK38Q15208 465 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 RILPL1Q5EBL4 403 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
COL9A1-207ENST00000486080 GNA11P29992 359 aa16.53■□□□□ 0.24
COL9A1-207ENST00000486080 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
COL9A1-207ENST00000486080 USH1GQ495M9 461 aa16.53■□□□□ 0.24
COL9A1-207ENST00000486080 FBXO11Q86XK2 927 aa16.53■□□□□ 0.24
COL9A1-207ENST00000486080 AMNQ9BXJ7 453 aa16.53■□□□□ 0.24
COL9A1-207ENST00000486080 RPAP3Q9H6T3 665 aaPredicted RBP16.53■□□□□ 0.24
COL9A1-207ENST00000486080 ZNF408Q9H9D4 720 aa16.53■□□□□ 0.24
COL9A1-207ENST00000486080 ADCY7P51828 1080 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 PTPAQ15257 358 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 MAP3K11Q16584 847 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 PPP1R18Q6NYC8 613 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 CCDC174Q6PII3 467 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.24
COL9A1-207ENST00000486080 TMEM260Q9NX78 707 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.24
COL9A1-207ENST00000486080 RLFQ13129 1914 aa16.52■□□□□ 0.24
COL9A1-207ENST00000486080 C19orf81C9J6K1 198 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 YEATS4O95619 227 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 SLC39A14Q15043 492 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 LDHDQ86WU2 507 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 C12orf42Q96LP6 360 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 SLF1Q9BQI6 1058 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 RIC8AQ9NPQ8 531 aa16.52■□□□□ 0.23
COL9A1-207ENST00000486080 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 SPTLC2O15270 562 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 FLOT1O75955 427 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-207ENST00000486080 ME1P48163 572 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 ARMC9Q7Z3E5 817 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
COL9A1-207ENST00000486080 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
COL9A1-207ENST00000486080 OTUD5Q96G74 571 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-207ENST00000486080 PSTPIP2Q9H939 334 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 PCDHA7Q9UN72 937 aa16.51■□□□□ 0.23
COL9A1-207ENST00000486080 MBD3O95983 291 aa16.5■□□□□ 0.23
COL9A1-207ENST00000486080 UBE2SQ16763 222 aa16.5■□□□□ 0.23
COL9A1-207ENST00000486080 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
COL9A1-207ENST00000486080 KCNG4Q8TDN1 519 aa16.5■□□□□ 0.23
COL9A1-207ENST00000486080 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
COL9A1-207ENST00000486080 GOLGA6L4A6NEF3 574 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 IRF6O14896 467 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 ZNF174Q15697 407 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 INF2Q27J81 1249 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 SH3D19Q5HYK7 790 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 TTC38Q5R3I4 469 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 LDLRAD1Q5T700 205 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
COL9A1-207ENST00000486080 ERO1BQ86YB8 467 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 CUL5Q93034 780 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L15C9J2P7 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L13C9JLJ4 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L11C9JVI0 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L18D6R9N7 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L22D6RA61 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L17D6RBQ6 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L19D6RCP7 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L20D6RJB6 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 PPATQ06203 517 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L24Q0WX57 530 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 USP17L6PQ6QN14 398 aa16.49■□□□□ 0.23
COL9A1-207ENST00000486080 KRT25Q7Z3Z0 450 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms