RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ACRP10323 421 aa23.13■■□□□ 1.29
CHRD-216ENST00000486066 ARMCX2Q7L311 632 aa23.13■■□□□ 1.29
CHRD-216ENST00000486066 AMOTL1Q8IY63 956 aa23.13■■□□□ 1.29
CHRD-216ENST00000486066 TMEM199Q8N511 208 aa23.13■■□□□ 1.29
CHRD-216ENST00000486066 DDX11Q96FC9 970 aa23.13■■□□□ 1.29
CHRD-216ENST00000486066 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.13■■□□□ 1.29
CHRD-216ENST00000486066 IL23AQ9NPF7 189 aa23.13■■□□□ 1.29
CHRD-216ENST00000486066 ARPP21Q9UBL0 812 aaPredicted RBP23.13■■□□□ 1.29
CHRD-216ENST00000486066 LCTP09848 1927 aa23.12■■□□□ 1.29
CHRD-216ENST00000486066 RPAP2Q8IXW5 612 aaPredicted RBP23.12■■□□□ 1.29
CHRD-216ENST00000486066 MKL1Q969V6 931 aa23.12■■□□□ 1.29
CHRD-216ENST00000486066 RAPGEFL1Q9UHV5 662 aa23.12■■□□□ 1.29
CHRD-216ENST00000486066 OAZ1P54368 228 aa23.11■■□□□ 1.29
CHRD-216ENST00000486066 GNASQ5JWF2 1037 aa23.11■■□□□ 1.29
CHRD-216ENST00000486066 ADAMTS19Q8TE59 1207 aa23.11■■□□□ 1.29
CHRD-216ENST00000486066 STRBPQ96SI9 672 aaKnown RBP23.11■■□□□ 1.29
CHRD-216ENST00000486066 PPP1R12CQ9BZL4 782 aa23.11■■□□□ 1.29
CHRD-216ENST00000486066 YBX2Q9Y2T7 364 aaKnown RBP23.11■■□□□ 1.29
CHRD-216ENST00000486066 GRIN2DO15399 1336 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 APBB1O00213 710 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 RAB11FIP3O75154 756 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 CYP2C18P33260 490 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 RAB30Q15771 203 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 CCDC144CPQ8IYA2 1237 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 FAM133AQ8N9E0 248 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 CHST13Q8NET6 341 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 ZBTB40Q9NUA8 1239 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 SYNPO2Q9UMS6 1093 aa23.1■■□□□ 1.29
CHRD-216ENST00000486066 GNEQ9Y223 722 aaKnown RBP23.1■■□□□ 1.29
CHRD-216ENST00000486066 UMODL1Q5DID0 1318 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 GSG1L2A8MUP6 293 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 MRPS5P82675 430 aaKnown RBP23.09■■□□□ 1.29
CHRD-216ENST00000486066 GIMAP6Q6P9H5 292 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 CCDC129Q6ZRS4 1044 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 CPXCR1Q8N123 301 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 DDRGK1Q96HY6 314 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 SPC25Q9HBM1 224 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 RAVER2Q9HCJ3 691 aaKnown RBP23.09■■□□□ 1.29
CHRD-216ENST00000486066 FBXO40Q9UH90 709 aa23.09■■□□□ 1.29
CHRD-216ENST00000486066 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.08■■□□□ 1.29
CHRD-216ENST00000486066 RAD21O60216 631 aa23.08■■□□□ 1.29
CHRD-216ENST00000486066 PPM1EQ8WY54 764 aa23.08■■□□□ 1.29
CHRD-216ENST00000486066 TCF20Q9UGU0 1960 aaKnown RBP23.07■■□□□ 1.28
CHRD-216ENST00000486066 PLIN4Q96Q06 1357 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 TLR3O15455 904 aaKnown RBP23.07■■□□□ 1.28
CHRD-216ENST00000486066 ZBED4O75132 1171 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 BEX3Q00994 111 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 CNTN2Q02246 1040 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 ANKRD35Q8N283 1001 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 GMCL1P1Q8NEA9 526 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 NOC4LQ9BVI4 516 aaKnown RBP23.07■■□□□ 1.28
CHRD-216ENST00000486066 WNT8AQ9H1J5 351 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 NKX2-4Q9H2Z4 354 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 EPB41L4AQ9HCS5 686 aaPredicted RBP23.07■■□□□ 1.28
CHRD-216ENST00000486066 FEM1BQ9UK73 627 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 ZNF536O15090 1300 aa23.07■■□□□ 1.28
CHRD-216ENST00000486066 PRRC2BQ5JSZ5 2229 aaKnown RBP23.06■■□□□ 1.28
CHRD-216ENST00000486066 UHRF1Q96T88 793 aaPredicted RBP23.06■■□□□ 1.28
CHRD-216ENST00000486066 MSRAQ9UJ68 235 aa23.06■■□□□ 1.28
CHRD-216ENST00000486066 SOWAHBA6NEL2 793 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 HMMRO75330 724 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 ZSCAN25Q6NSZ9 544 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 CXCL17Q6UXB2 119 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 KIFC2Q96AC6 838 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 CEP95Q96GE4 821 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 HIPK3Q9H422 1215 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 MTMR4Q9NYA4 1195 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 CLIP2Q9UDT6 1046 aa23.05■■□□□ 1.28
CHRD-216ENST00000486066 CABYRO75952 493 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 FGBP02675 491 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 BMP1P13497 986 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 PTGS1P23219 599 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 TNFAIP2Q03169 654 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 OSBP2Q969R2 916 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 VTI1AQ96AJ9 217 aa23.04■■□□□ 1.28
CHRD-216ENST00000486066 A1CFQ9NQ94 594 aaKnown RBP23.04■■□□□ 1.28
CHRD-216ENST00000486066 PLA2G5P39877 138 aa23.03■■□□□ 1.28
CHRD-216ENST00000486066 ITGA7Q13683 1181 aa23.03■■□□□ 1.28
CHRD-216ENST00000486066 CCDC85BQ15834 202 aaPredicted RBP23.03■■□□□ 1.28
CHRD-216ENST00000486066 SEZ6LQ9BYH1 1024 aa23.03■■□□□ 1.28
CHRD-216ENST00000486066 SLC28A3Q9HAS3 691 aa23.03■■□□□ 1.28
CHRD-216ENST00000486066 MKNK2Q9HBH9 465 aa23.03■■□□□ 1.28
CHRD-216ENST00000486066 B4GALT4O60513 344 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 FDX1P10109 184 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 POU3F3P20264 500 aaPredicted RBP23.02■■□□□ 1.28
CHRD-216ENST00000486066 FSCN1Q16658 493 aaKnown RBP23.02■■□□□ 1.28
CHRD-216ENST00000486066 OTOP2Q7RTS6 562 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 TLK2Q86UE8 772 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 AGBL1Q96MI9 1066 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 MTIF3Q9H2K0 278 aaKnown RBP23.02■■□□□ 1.28
CHRD-216ENST00000486066 ACAD9Q9H845 621 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 SCN5AQ14524 2016 aa23.02■■□□□ 1.28
CHRD-216ENST00000486066 SMPD1P17405 629 aa23.01■■□□□ 1.27
CHRD-216ENST00000486066 IGFBP4P22692 258 aa23.01■■□□□ 1.27
CHRD-216ENST00000486066 TMEM63BQ5T3F8 832 aa23.01■■□□□ 1.27
CHRD-216ENST00000486066 TAPT1Q6NXT6 567 aa23.01■■□□□ 1.27
CHRD-216ENST00000486066 LRRC47Q8N1G4 583 aaKnown RBP23.01■■□□□ 1.27
CHRD-216ENST00000486066 TRPV6Q9H1D0 765 aa23.01■■□□□ 1.27
CHRD-216ENST00000486066 PCDHA11Q9Y5I1 949 aa23.01■■□□□ 1.27
CHRD-216ENST00000486066 SCN10AQ9Y5Y9 1956 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms