RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 AKR1A1P14550 325 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 ITGB8P26012 769 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 SMAD3P84022 425 aaKnown RBP24.72■■□□□ 1.55
LMBR1-217ENST00000485985 NUCB1Q02818 461 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 PLEKHM2Q8IWE5 1019 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 GMCL1Q96IK5 515 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 STX8Q9UNK0 236 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 UNC80Q8N2C7 3258 aa24.72■■□□□ 1.55
LMBR1-217ENST00000485985 CCDC171Q6TFL3 1326 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 DNAJC25-GNG10A0A024R161 153 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 TMEM232C9JQI7 657 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 FGAP02671 866 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 CLTBP09497 229 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 FGRP09769 529 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 HSPD1P10809 573 aaKnown RBP24.71■■□□□ 1.55
LMBR1-217ENST00000485985 SLC4A3P48751 1232 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 STAT2P52630 851 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.71■■□□□ 1.55
LMBR1-217ENST00000485985 TICAM2Q86XR7 235 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 RILPL2Q969X0 211 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 ISY1Q9ULR0 285 aaKnown RBP24.71■■□□□ 1.55
LMBR1-217ENST00000485985 CNPY2Q9Y2B0 182 aa24.71■■□□□ 1.55
LMBR1-217ENST00000485985 A0A1W2PQ45 241 aaPredicted RBP24.7■■□□□ 1.54
LMBR1-217ENST00000485985 A0A1W2PQY0 241 aa24.7■■□□□ 1.54
LMBR1-217ENST00000485985 RANBP6O60518 1105 aaKnown RBP24.7■■□□□ 1.54
LMBR1-217ENST00000485985 ADAMTS4O75173 837 aa24.7■■□□□ 1.54
LMBR1-217ENST00000485985 MCCP23508 829 aa24.7■■□□□ 1.54
LMBR1-217ENST00000485985 MSL3Q8N5Y2 521 aaKnown RBP24.7■■□□□ 1.54
LMBR1-217ENST00000485985 LENG1Q96BZ8 264 aaPredicted RBP24.7■■□□□ 1.54
LMBR1-217ENST00000485985 OSBPL3Q9H4L5 887 aa24.7■■□□□ 1.54
LMBR1-217ENST00000485985 KIAA0355O15063 1070 aa24.69■■□□□ 1.54
LMBR1-217ENST00000485985 SLC1A4P43007 532 aa24.69■■□□□ 1.54
LMBR1-217ENST00000485985 NOVP48745 357 aa24.69■■□□□ 1.54
LMBR1-217ENST00000485985 OAZ1P54368 228 aa24.69■■□□□ 1.54
LMBR1-217ENST00000485985 FGD4Q96M96 766 aa24.69■■□□□ 1.54
LMBR1-217ENST00000485985 CTDP1Q9Y5B0 961 aaPredicted RBP24.69■■□□□ 1.54
LMBR1-217ENST00000485985 ZNF536O15090 1300 aa24.68■■□□□ 1.54
LMBR1-217ENST00000485985 PQBP1O60828 265 aaKnown RBP24.68■■□□□ 1.54
LMBR1-217ENST00000485985 PPP4R3BQ5MIZ7 849 aa24.68■■□□□ 1.54
LMBR1-217ENST00000485985 KCTD1Q719H9 257 aa24.68■■□□□ 1.54
LMBR1-217ENST00000485985 DDX11Q96FC9 970 aa24.68■■□□□ 1.54
LMBR1-217ENST00000485985 TSEN34Q9BSV6 310 aaKnown RBP24.68■■□□□ 1.54
LMBR1-217ENST00000485985 TTYH1Q9H313 450 aaPredicted RBP24.68■■□□□ 1.54
LMBR1-217ENST00000485985 HOMER2Q9NSB8 354 aa24.68■■□□□ 1.54
LMBR1-217ENST00000485985 SYNGAP1Q96PV0 1343 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 SNAI1O95863 264 aaPredicted RBP24.67■■□□□ 1.54
LMBR1-217ENST00000485985 RAG1P15918 1043 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 SDSP20132 328 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 ACLYP53396 1101 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 EPHB4P54760 987 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 HAND2P61296 217 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 MAMDC4Q6UXC1 1216 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 FAM160B2Q86V87 743 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 STAG1Q8WVM7 1258 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 FAM184BQ9ULE4 1060 aa24.67■■□□□ 1.54
LMBR1-217ENST00000485985 SYNRGQ9UMZ2 1314 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 IKQ13123 557 aaPredicted RBP24.66■■□□□ 1.54
LMBR1-217ENST00000485985 RRP12Q5JTH9 1297 aaKnown RBP24.66■■□□□ 1.54
LMBR1-217ENST00000485985 ANKRD33Q7Z3H0 272 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 TBC1D10CQ8IV04 446 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 KLHDC9Q8NEP7 349 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 CHST13Q8NET6 341 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 TOX2Q96NM4 488 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 TOMM22Q9NS69 142 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 TMEM39AQ9NV64 488 aa24.66■■□□□ 1.54
LMBR1-217ENST00000485985 SNAP25P60880 206 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 FAAP100Q0VG06 881 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 RCSD1Q6JBY9 416 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 ZNF467Q7Z7K2 595 aaPredicted RBP24.65■■□□□ 1.54
LMBR1-217ENST00000485985 ANKRD35Q8N283 1001 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 MAFAQ8NHW3 353 aaPredicted RBP24.65■■□□□ 1.54
LMBR1-217ENST00000485985 CHURC1Q8WUH1 139 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 NUP133Q8WUM0 1156 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 RNPC3Q96LT9 517 aaKnown RBP24.65■■□□□ 1.54
LMBR1-217ENST00000485985 AGBL1Q96MI9 1066 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 STARD7Q9NQZ5 370 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 FBXO40Q9UH90 709 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 MTMR7Q9Y216 660 aa24.65■■□□□ 1.54
LMBR1-217ENST00000485985 MOXD2PA6NHM9 499 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 DCDC2CA8MYV0 355 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 PLA2G6O60733 806 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 FDX1P10109 184 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 FPGSQ05932 587 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 KCNA10Q16322 511 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 CCSAPQ6IQ19 270 aaPredicted RBP24.64■■□□□ 1.54
LMBR1-217ENST00000485985 MYLIPQ8WY64 445 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 ZHX1Q9UKY1 873 aaPredicted RBP24.64■■□□□ 1.54
LMBR1-217ENST00000485985 PRR12Q9ULL5 1215 aa24.64■■□□□ 1.54
LMBR1-217ENST00000485985 SUPT16HQ9Y5B9 1047 aaKnown RBP24.64■■□□□ 1.54
LMBR1-217ENST00000485985 ACAD9Q9H845 621 aa24.63■■□□□ 1.53
LMBR1-217ENST00000485985 RNF146Q9NTX7 359 aa24.63■■□□□ 1.53
LMBR1-217ENST00000485985 NEDD4P46934 1319 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 ADCY6O43306 1168 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 DUSP11O75319 330 aaKnown RBP24.62■■□□□ 1.53
LMBR1-217ENST00000485985 CNTN2Q02246 1040 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 ACVR2BQ13705 512 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 CCDC96Q2M329 555 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 CCDC174Q6PII3 467 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 DCAF4Q8WV16 495 aa24.62■■□□□ 1.53
LMBR1-217ENST00000485985 TMEM47Q9BQJ4 181 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms