RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 METTL14Q9HCE5 456 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 IRAK4Q9NWZ3 460 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 LEMD3Q9Y2U8 911 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 XDHP47989 1333 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 KDRP35968 1356 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 CLRN2A0PK11 232 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 CHL1O00533 1208 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SGSM2O43147 1006 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 TRIM37O94972 964 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 IL13P35225 146 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 IREB2P48200 963 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 RINT1Q6NUQ1 792 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SCYL1Q96KG9 808 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 Q3C1V9 767 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 MICAL1Q8TDZ2 1067 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 POMGNT1Q8WZA1 660 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 AMNQ9BXJ7 453 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 DISC1Q9NRI5 854 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 ZNF804BA4D1E1 1349 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SYNJ2BP-COX16A0A087WUM0 186 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 E7EWF7 191 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 KIF3CO14782 793 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SIK1P57059 783 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 NAA25Q14CX7 972 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 STAMQ92783 540 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 TTC1Q99614 292 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 ZBED2Q9BTP6 218 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 COX16Q9P0S2 106 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 PCDHA1Q9Y5I3 950 aa11.6□□□□□ -0.55
SRGAP3-207ENST00000485983 KDM2BQ8NHM5 1336 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 HEXIM1O94992 359 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 CC2D2BQ6DHV5 1058 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 IFNL3Q8IZI9 196 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 CEP120Q8N960 986 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 CCDC127Q96BQ5 260 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 OR52Z1P0C646 297 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 BPIFB4P59827 614 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 C1orf228Q6PIY5 440 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 RSRC1Q96IZ7 334 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 HAUS8Q9BT25 410 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 IFIH1Q9BYX4 1025 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 ABCB4P21439 1286 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 PPP2R5EQ16537 467 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 DENND2CQ68D51 928 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 PPM1KQ8N3J5 372 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 ANKRD36BP1Q96IX9 119 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 CDHR1Q96JP9 859 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 INO80B-WBP1J3KQ70 363 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 GBP1P32455 592 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 PIK3CAP42336 1068 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 CHRNDQ07001 517 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 TMTC4Q5T4D3 741 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 AFAP1L1Q8TED9 768 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 INO80BQ9C086 356 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-207ENST00000485983 SRGAP2BP0DMP2 458 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 GPATCH4Q5T3I0 446 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ZBTB9Q96C00 473 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ANGPTL3Q9Y5C1 460 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ARHGAP6O43182 974 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 CSPG5O95196 566 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 PCP11498 1178 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 CCDC93Q567U6 631 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 NXNQ6DKJ4 435 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 MIS18BP1Q6P0N0 1132 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ZNF215Q9UL58 517 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ATP8B3O60423 1300 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 TROVE2P10155 538 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 RLBP1P12271 317 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 KRT27Q7Z3Y8 459 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 GPIHBP1Q8IV16 184 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 MIPOL1Q8TD10 442 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 KIAA0556O60303 1618 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 BBOX1O75936 387 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 SERPINB2P05120 415 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 ARPP19P56211 112 aa11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-207ENST00000485983 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms