RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
SMC4-217ENST00000485867 TXNRD3Q86VQ6 643 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 KIAA0825Q8IV33 1275 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 DEFB123Q8N688 67 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 OPTNQ96CV9 577 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.044e-6■■■■□ 21.2
SMC4-217ENST00000485867 ZMIZ1Q9ULJ6 1067 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 PPP2R3BQ9Y5P8 575 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
SMC4-217ENST00000485867 ZNF804BA4D1E1 1349 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 USP2O75604 605 aaPredicted RBP8.56□□□□□ -1.04
SMC4-217ENST00000485867 GJB1P08034 283 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 PRMT2P55345 433 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 LACTBP83111 547 aaPredicted RBP8.56□□□□□ -1.04
SMC4-217ENST00000485867 OCLNQ16625 522 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
SMC4-217ENST00000485867 Q7L0L9 218 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 TREML1Q86YW5 311 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 ANKRD13AQ8IZ07 590 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 FAM43AQ8N2R8 423 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 TTC9Q92623 222 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 PLEKHF1Q96S99 279 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 CHPF2Q9P2E5 772 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 STAP2Q9UGK3 403 aa8.56□□□□□ -1.04
SMC4-217ENST00000485867 CCL15-CCL14A0A0B4J2E2 113 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 FARP2O94887 1054 aaPredicted RBP8.55□□□□□ -1.04
SMC4-217ENST00000485867 NEFMP07197 916 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 NRLP54845 237 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
SMC4-217ENST00000485867 KIF22Q14807 665 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 CCL15Q16663 113 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 SUPT20HL1Q3ZLR7 823 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 CCDC152Q4G0S7 254 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 ELMSAN1Q6PJG2 1045 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 ANKRD18AQ8IVF6 992 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 ZBTB38Q8NAP3 1195 aaPredicted RBP8.55□□□□□ -1.04
SMC4-217ENST00000485867 COA1Q9GZY4 146 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 MTMR10Q9NXD2 777 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 PCDHAC2Q9Y5I4 1007 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 VCANP13611 3396 aa8.55□□□□□ -1.04
SMC4-217ENST00000485867 A0A1B0GUL6 1792 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 TLR2O60603 784 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 XYLBO75191 536 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 CCL5P13501 91 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 DLGAP5Q15398 846 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 KRT24Q2M2I5 525 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 PRSS36Q5K4E3 855 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 TTLL5Q6EMB2 1281 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 FBXO11Q86XK2 927 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC4-217ENST00000485867 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 BABAM1Q9NWV8 329 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
SMC4-217ENST00000485867 SRRDQ9UH36 339 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 AOX1Q06278 1338 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 CLSPNQ9HAW4 1339 aa8.54□□□□□ -1.04
SMC4-217ENST00000485867 DOCK3Q8IZD9 2030 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 CLRN2A0PK11 232 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 PDE8AO60658 829 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 PRMT3O60678 531 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
SMC4-217ENST00000485867 CTGFP29279 349 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 GRK4P32298 578 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 BMP8BP34820 402 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 CCT4P50991 539 aaKnown RBP8.53□□□□□ -1.04
SMC4-217ENST00000485867 GTF2A2P52657 109 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 ETFBKMTQ8IXQ9 262 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 STK32AQ8WU08 396 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 U2AF1L4Q8WU68 220 aaKnown RBP8.53□□□□□ -1.04
SMC4-217ENST00000485867 GDF15Q99988 308 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
SMC4-217ENST00000485867 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 SMG9Q9H0W8 520 aaKnown RBP8.53□□□□□ -1.04
SMC4-217ENST00000485867 RNF208Q9H0X6 261 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 MINPP1Q9UNW1 487 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 RIPOR2Q9Y4F9 1068 aa8.53□□□□□ -1.04
SMC4-217ENST00000485867 PCCAP05165 728 aaPredicted RBP8.52□□□□□ -1.05
SMC4-217ENST00000485867 KLRK1P26718 216 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 ARID4AP29374 1257 aaPredicted RBP8.52□□□□□ -1.05
SMC4-217ENST00000485867 RASA3Q14644 834 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.52□□□□□ -1.05
SMC4-217ENST00000485867 HFE2Q6ZVN8 426 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 WFDC8Q8IUA0 241 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 CMTR1Q8N1G2 835 aaKnown RBP8.52□□□□□ -1.05
SMC4-217ENST00000485867 CERS5Q8N5B7 392 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 RAET1EQ8TD07 263 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 CDC5LQ99459 802 aaKnown RBP8.52□□□□□ -1.05
SMC4-217ENST00000485867 VEZTQ9HBM0 779 aa8.52□□□□□ -1.05
SMC4-217ENST00000485867 ZCCHC17Q9NP64 241 aaKnown RBP8.52□□□□□ -1.05
SMC4-217ENST00000485867 SPTBN5Q9NRC6 3674 aaKnown RBP8.51□□□□□ -1.05
SMC4-217ENST00000485867 BTBD19C9JJ37 291 aa8.51□□□□□ -1.05
SMC4-217ENST00000485867 MYO1BO43795 1136 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms