RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CFHR5Q9BXR6 569 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 SLC26A6Q9BXS9 759 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 RBPJLQ9UBG7 517 aa18.34■□□□□ 0.53
APOE-205ENST00000485628 TMEM132BQ14DG7 1078 aa18.33■□□□□ 0.52
APOE-205ENST00000485628 CDC37Q16543 378 aaPredicted RBP18.33■□□□□ 0.52
APOE-205ENST00000485628 FAM177A1Q8N128 213 aaPredicted RBP18.33■□□□□ 0.52
APOE-205ENST00000485628 DNAJC5GQ8N7S2 189 aa18.33■□□□□ 0.52
APOE-205ENST00000485628 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
APOE-205ENST00000485628 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
APOE-205ENST00000485628 BTBD7Q9P203 1132 aa18.33■□□□□ 0.52
APOE-205ENST00000485628 ORC3Q9UBD5 711 aaPredicted RBP18.33■□□□□ 0.52
APOE-205ENST00000485628 PNMA3Q9UL41 463 aa18.33■□□□□ 0.52
APOE-205ENST00000485628 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 CYP2C8P10632 490 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 SCG2P13521 617 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
APOE-205ENST00000485628 TYW1BQ6NUM6 668 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 TRIM22Q8IYM9 498 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
APOE-205ENST00000485628 AIFM3Q96NN9 605 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 IPO9Q96P70 1041 aaKnown RBP18.32■□□□□ 0.52
APOE-205ENST00000485628 TXNRD2Q9NNW7 524 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 RABGAP1Q9Y3P9 1069 aa18.32■□□□□ 0.52
APOE-205ENST00000485628 hCG_1984214I3L0E3 225 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 ICAM1P05362 532 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 GJB2P29033 226 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 SNAP25P60880 206 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 WWC2Q6AWC2 1192 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.31■□□□□ 0.52
APOE-205ENST00000485628 ZNF713Q8N859 430 aaPredicted RBP18.31■□□□□ 0.52
APOE-205ENST00000485628 SH3GLB2Q9NR46 395 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 BARHL2Q9NY43 387 aa18.31■□□□□ 0.52
APOE-205ENST00000485628 STXBP3O00186 592 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 OPLAHO14841 1288 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 BCRP11274 1271 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
APOE-205ENST00000485628 IKQ13123 557 aaPredicted RBP18.3■□□□□ 0.52
APOE-205ENST00000485628 NPY5RQ15761 445 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 Q3C1V9 767 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 OTUD7BQ6GQQ9 843 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 PARK7Q99497 189 aaKnown RBP18.3■□□□□ 0.52
APOE-205ENST00000485628 CWC22Q9HCG8 908 aaKnown RBP18.3■□□□□ 0.52
APOE-205ENST00000485628 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
APOE-205ENST00000485628 CA12O43570 354 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 ZBED4O75132 1171 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 ALDH1A1P00352 501 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 GHRHRQ02643 423 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 C17orf99Q6UX52 265 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 PAXIP1Q6ZW49 1069 aaPredicted RBP18.29■□□□□ 0.52
APOE-205ENST00000485628 FBXO11Q86XK2 927 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 HOMER1Q86YM7 354 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 WASF1Q92558 559 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 AGBL1Q96MI9 1066 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
APOE-205ENST00000485628 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 TLR2O60603 784 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 FBXO18Q8NFZ0 1043 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 MAF1Q9H063 256 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 ZMYND12Q9H0C1 365 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 RAVER2Q9HCJ3 691 aaKnown RBP18.28■□□□□ 0.52
APOE-205ENST00000485628 SEC63Q9UGP8 760 aaKnown RBP18.28■□□□□ 0.52
APOE-205ENST00000485628 ISY1Q9ULR0 285 aaKnown RBP18.28■□□□□ 0.52
APOE-205ENST00000485628 RIPK3Q9Y572 518 aa18.28■□□□□ 0.52
APOE-205ENST00000485628 M0R2N6 131 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 PEX10O60683 326 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 STAT3P40763 770 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 ERVK-9P63128 1117 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 ERVK-24P63145 666 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 AKAP17AQ02040 695 aaKnown RBP18.27■□□□□ 0.52
APOE-205ENST00000485628 TRAF1Q13077 416 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 FAM110CQ1W6H9 321 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 TKFCQ3LXA3 575 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 PPP1R18Q6NYC8 613 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 TEX2Q8IWB9 1127 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 PIBF1Q8WXW3 757 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.52
APOE-205ENST00000485628 COA7Q96BR5 231 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 PHF20Q9BVI0 1012 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 SPATC1LQ9H0A9 340 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 GJB4Q9NTQ9 266 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.52
APOE-205ENST00000485628 PCNTO95613 3336 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 GRM1Q13255 1194 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 CRHR2Q13324 411 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 TAF1CQ15572 869 aaPredicted RBP18.26■□□□□ 0.51
APOE-205ENST00000485628 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 DAGLBQ8NCG7 672 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 SHCBP1Q8NEM2 672 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 MOV10L1Q9BXT6 1211 aaKnown RBP18.26■□□□□ 0.51
APOE-205ENST00000485628 R3HDMLQ9H3Y0 253 aa18.26■□□□□ 0.51
APOE-205ENST00000485628 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms