RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 PALM3A6NDB9 673 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-215ENST00000484252 SASH3O75995 380 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 CDC25AP30304 524 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 ARHGAP25P42331 645 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 SLC20A2Q08357 652 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 MSANTD4Q8NCY6 345 aa22.13■■□□□ 1.13
LIMS2-215ENST00000484252 GIMAP8Q8ND71 665 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-215ENST00000484252 SH3RF3Q8TEJ3 882 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-215ENST00000484252 MAGEC2Q9UBF1 373 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-215ENST00000484252 KLRC4O43908 158 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 LDHCP07864 332 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 PIP4K2BP78356 416 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 PDE4CQ08493 712 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 HEATR3Q7Z4Q2 680 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 OR8K1Q8NGG5 319 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 CCDC47Q96A33 483 aaKnown RBP22.12■■□□□ 1.13
LIMS2-215ENST00000484252 DYNLL2Q96FJ2 89 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 DHTKD1Q96HY7 919 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-215ENST00000484252 FUT8Q9BYC5 575 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 TMEM60Q9H2L4 133 aa22.12■■□□□ 1.13
LIMS2-215ENST00000484252 SRP68Q9UHB9 627 aaKnown RBP22.12■■□□□ 1.13
LIMS2-215ENST00000484252 RNF225M0QZC1 329 aaPredicted RBP22.11■■□□□ 1.13
LIMS2-215ENST00000484252 TUBBP07437 444 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 PPP1R2P41236 205 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 INF2Q27J81 1249 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 RAB21Q9UL25 225 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 MAPK8IP1Q9UQF2 711 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 CYP2C19P33261 490 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 LONRF2Q1L5Z9 754 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 DNAJC7Q99615 494 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 SPZ1Q9BXG8 430 aa22.11■■□□□ 1.13
LIMS2-215ENST00000484252 EPN1Q9Y6I3 576 aaPredicted RBP22.11■■□□□ 1.13
LIMS2-215ENST00000484252 USP17L3A6NCW0 530 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 USP17L4A6NCW7 530 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 CYTH3O43739 400 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 SMC1AQ14683 1233 aaKnown RBP22.1■■□□□ 1.13
LIMS2-215ENST00000484252 TSR1Q2NL82 804 aaKnown RBP22.1■■□□□ 1.13
LIMS2-215ENST00000484252 USP17L1Q7RTZ2 530 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 KRT25Q7Z3Z0 450 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 ZNF507Q8TCN5 953 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 TMEM47Q9BQJ4 181 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 PUF60Q9UHX1 559 aaKnown RBP22.1■■□□□ 1.13
LIMS2-215ENST00000484252 CAPN11Q9UMQ6 739 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 JAG2Q9Y219 1238 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 LUC7L2Q9Y383 392 aaKnown RBP22.1■■□□□ 1.13
LIMS2-215ENST00000484252 BAZ2BQ9UIF8 2168 aaKnown RBP22.1■■□□□ 1.13
LIMS2-215ENST00000484252 NDUFA10O95299 355 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 DNM2P50570 870 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 KCNQ4P56696 695 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 SLC35G1Q2M3R5 365 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 SLC4A8Q2Y0W8 1093 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 TRIM47Q96LD4 638 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 SLF1Q9BQI6 1058 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 ZMYND12Q9H0C1 365 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 ANKZF1Q9H8Y5 726 aa22.1■■□□□ 1.13
LIMS2-215ENST00000484252 NAV1Q8NEY1 1877 aa22.09■■□□□ 1.13
LIMS2-215ENST00000484252 TRIM49BA6NDI0 452 aa22.09■■□□□ 1.13
LIMS2-215ENST00000484252 ERLIN1O75477 346 aa22.09■■□□□ 1.13
LIMS2-215ENST00000484252 ZSWIM4Q9H7M6 989 aa22.09■■□□□ 1.13
LIMS2-215ENST00000484252 TTC26A0AVF1 554 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 BICDL2A1A5D9 508 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 CTAGE15A4D2H0 777 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 PP2D1A8MPX8 630 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 CTAGE8P0CG41 777 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 ORC2Q13416 577 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-215ENST00000484252 TTI2Q6NXR4 508 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 ZNF662Q6ZS27 426 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 C15orf52Q6ZUT6 534 aaKnown RBP22.08■■□□□ 1.13
LIMS2-215ENST00000484252 ZNF804AQ7Z570 1209 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 CTAGE6Q86UF2 777 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 CTAGE4Q8IX94 777 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 MSL3Q8N5Y2 521 aaKnown RBP22.08■■□□□ 1.13
LIMS2-215ENST00000484252 RETREG2Q8NC44 543 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 NUP58Q9BVL2 599 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 HAUS4Q9H6D7 363 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 ANKIB1Q9P2G1 1089 aa22.08■■□□□ 1.13
LIMS2-215ENST00000484252 MYH8P13535 1937 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 MAP2K7O14733 419 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 GNPATO15228 680 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 OR52Z1P0C646 297 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 RASA1P20936 1047 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 SMARCA1P28370 1054 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 OAS2P29728 719 aaKnown RBP22.08■■□□□ 1.12
LIMS2-215ENST00000484252 CABP7Q86V35 215 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 FAM114A1Q8IWE2 563 aa22.08■■□□□ 1.12
LIMS2-215ENST00000484252 FLT1P17948 1338 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 KLRF2D3W0D1 207 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 SRGNP10124 158 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 GNA11P29992 359 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 PMS1P54277 932 aaKnown RBP22.07■■□□□ 1.12
LIMS2-215ENST00000484252 GRAPQ13588 217 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 NONOQ15233 471 aaKnown RBP eCLIP22.07■■□□□ 1.12
LIMS2-215ENST00000484252 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 GRAPLQ8TC17 118 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-215ENST00000484252 TGFBRAP1Q8WUH2 860 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 CHP1Q99653 195 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 TSPYL1Q9H0U9 437 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 C6orf50Q9HD87 102 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 STX8Q9UNK0 236 aa22.07■■□□□ 1.12
LIMS2-215ENST00000484252 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms