RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 TBX2Q13207 712 aaPredicted RBP8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 CUL4BQ13620 913 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 NR1I3Q14994 352 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 FILIP1LQ4L180 1135 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 SOGA3Q5TF21 947 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 SPECC1LQ69YQ0 1117 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 PPP1R18Q6NYC8 613 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 HEATR3Q7Z4Q2 680 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 PODNQ7Z5L7 613 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 PROM2Q8N271 834 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 SLC44A5Q8NCS7 719 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 C16orf45Q96MC5 204 aaPredicted RBP8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 EHD4Q9H223 541 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 TMX1Q9H3N1 280 aa8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 COL11A2P13942 1736 aaPredicted RBP8.36□□□□□ -1.07
SHROOM3-206ENST00000484236 SYNRGQ9UMZ2 1314 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 SNPHO15079 494 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 ARHGAP6O43182 974 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 ZSCAN12O43309 604 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 HLA-DOAP06340 250 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 SNHG28P0DPA3 235 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 VEGFAP15692 232 aaPredicted RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 PPP1R2P41236 205 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 AFMP43652 599 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 NAPAP54920 295 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 KCNB1Q14721 858 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 NONOQ15233 471 aaKnown RBP eCLIP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 IL17AQ16552 155 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 SLC35G1Q2M3R5 365 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 ZNF658Q5TYW1 1059 aaPredicted RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 E4F1Q66K89 784 aaPredicted RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 ZNF772Q68DY9 489 aaPredicted RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 GRAMD1CQ8IYS0 662 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 ANKRD20A12PQ8NF67 263 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 KIF18AQ8NI77 898 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 DPF2Q92785 391 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 CEP95Q96GE4 821 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 CCDC17Q96LX7 622 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 MTMR4Q9NYA4 1195 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 RWDD2AQ9UIY3 292 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 TTF2Q9UNY4 1162 aaKnown RBP8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 MYH4Q9Y623 1939 aa8.35□□□□□ -1.07
SHROOM3-206ENST00000484236 ITIH6Q6UXX5 1313 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 SMCO2A6NFE2 343 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 STX10O60499 249 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 TTLL1O95922 423 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 OR52Z1P0C646 297 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 PDHBP11177 359 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 UBA7P41226 1012 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 STAT6P42226 847 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 NEK8Q86SG6 692 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 CCDC47Q96A33 483 aaKnown RBP8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 CCDC51Q96ER9 411 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 PPP1R13BQ96KQ4 1090 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 MED15Q96RN5 788 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 NAA15Q9BXJ9 866 aaKnown RBP8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 GLT8D2Q9H1C3 349 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 DHX36Q9H2U1 1008 aaKnown RBP8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 USP40Q9NVE5 1235 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 INTS13Q9NVM9 706 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 SERPINB13Q9UIV8 391 aa8.34□□□□□ -1.07
SHROOM3-206ENST00000484236 LRRC10BA6NIK2 292 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 USP27XA6NNY8 438 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 G3V3G9 751 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 SLC26A4O43511 780 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 RPN1P04843 607 aaKnown RBP8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 AMPD3Q01432 767 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 PAK1Q13153 545 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 STIM1Q13586 685 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 ZNF827Q17R98 1081 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 INF2Q27J81 1249 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 GPATCH4Q5T3I0 446 aaKnown RBP8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 DCAF8Q5TAQ9 597 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 STRIP1Q5VSL9 837 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 CDC42EP5Q6NZY7 148 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 APTXQ7Z2E3 356 aaKnown RBP8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 REXO1Q8N1G1 1221 aaKnown RBP8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 CERS5Q8N5B7 392 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 NOC3LQ8WTT2 800 aaKnown RBP8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 PANX2Q96RD6 677 aa8.33□□□□□ -1.08
SHROOM3-206ENST00000484236 NAP1L4Q99733 375 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms