RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SERPINB13Q9UIV8 391 aa7.43□□□□□ -1.22
PTCD3-215ENST00000484203 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
PTCD3-215ENST00000484203 ZNF646O15015 1829 aaPredicted RBP7.43□□□□□ -1.22
PTCD3-215ENST00000484203 USP17L10C9JJH3 530 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 SPINT1O43278 529 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 BCRP11274 1271 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 PSMC4P43686 418 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 USP14P54578 494 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 SOX10P56693 466 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 BACE1P56817 501 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 UBXN2AP68543 259 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 IRX3P78415 501 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-215ENST00000484203 MOGSQ13724 837 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 UBE3CQ15386 1083 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 FAM110CQ1W6H9 321 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-215ENST00000484203 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 USP17L2Q6R6M4 530 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 SIRT2Q8IXJ6 389 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 RAET1EQ8TD07 263 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 COA7Q96BR5 231 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 ZNF333Q96JL9 665 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 INSM2Q96T92 566 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-215ENST00000484203 HAUS7Q99871 368 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 ATP8A2Q9NTI2 1148 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 PAG1Q9NWQ8 432 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 SWAP70Q9UH65 585 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 CPA4Q9UI42 421 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 PALD1Q9ULE6 856 aa7.42□□□□□ -1.22
PTCD3-215ENST00000484203 ARAP2Q8WZ64 1704 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 A0A1B0GUL6 1792 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 MEN1O00255 615 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 GOLIM4O00461 696 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 ERC2O15083 957 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 POLR3DP05423 398 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 ZFYP08048 801 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 CYP2C8P10632 490 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 SNRPBP14678 240 aaKnown RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 PDE6AP16499 860 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 HOXA7P31268 230 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 SLC4A8Q2Y0W8 1093 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 CERKLQ49MI3 558 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 TATDN1Q6P1N9 297 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 ADGRA1Q86SQ6 560 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 TICAM2Q86XR7 235 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 MIGA1Q8NAN2 632 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 DNAJC2Q99543 621 aaKnown RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 DCTPP1Q9H773 170 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 ARHGEF10LQ9HCE6 1279 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 POLMQ9NP87 494 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 RAB6BQ9NRW1 208 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 ECHDC1Q9NTX5 307 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 MAFBQ9Y5Q3 323 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-215ENST00000484203 ADGRA2Q96PE1 1338 aa7.41□□□□□ -1.22
PTCD3-215ENST00000484203 A0A1W2PRU2 124 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 TNPO2O14787 897 aaKnown RBP7.4□□□□□ -1.22
PTCD3-215ENST00000484203 GRK4P32298 578 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 HMGCS2P54868 508 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 ABCB5Q2M3G0 1257 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
PTCD3-215ENST00000484203 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-215ENST00000484203 CCDC17Q96LX7 622 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 FEZ1Q99689 392 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 RIOK1Q9BRS2 568 aaKnown RBP7.4□□□□□ -1.22
PTCD3-215ENST00000484203 BOLA2Q9H3K6 86 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 ANTXR1Q9H6X2 564 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 SH2D4AQ9H788 454 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 ZNF287Q9HBT7 754 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 MCM9Q9NXL9 1143 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 BIN2Q9UBW5 565 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-215ENST00000484203 ZBTB21Q9ULJ3 1066 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 MYPNQ86TC9 1320 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 ZNF532Q9HCE3 1301 aa7.4□□□□□ -1.22
PTCD3-215ENST00000484203 PDE4DIPQ5VU43 2346 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 CASP8AP2Q9UKL3 1982 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 TTC41PQ6P2S7 1318 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 FAM196BA6NMK8 535 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 TTLL8A6PVC2 850 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 MAN1A2O60476 641 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 GLRX3O76003 335 aaKnown RBP7.39□□□□□ -1.23
PTCD3-215ENST00000484203 GH2P01242 217 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 GNAT2P19087 354 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 RFX1P22670 979 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 MAPK4P31152 587 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 ADD2P35612 726 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 CTSOP43234 321 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-215ENST00000484203 DYNLL1P63167 89 aaKnown RBP7.39□□□□□ -1.23
PTCD3-215ENST00000484203 CCNA1P78396 465 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 NFX1Q12986 1120 aaKnown RBP7.39□□□□□ -1.23
PTCD3-215ENST00000484203 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 GPRC5AQ8NFJ5 357 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 SOCS4Q8WXH5 440 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 GCC1Q96CN9 775 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 C12orf42Q96LP6 360 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 KIAA1683Q9H0B3 1180 aa7.39□□□□□ -1.23
PTCD3-215ENST00000484203 ASCC2Q9H1I8 757 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-215ENST00000484203 MORF4L1Q9UBU8 362 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms