RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 HOXB4P17483 251 aaPredicted RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 NRLP54845 237 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 HABP4Q5JVS0 413 aaKnown RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 TTLL5Q6EMB2 1281 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 LINC00114Q6XXX2 140 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 OTOP1Q7RTM1 612 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 MICALL1Q8N3F8 863 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 MYBBP1AQ9BQG0 1328 aaKnown RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 METTL22Q9BUU2 404 aaPredicted RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 COA1Q9GZY4 146 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 RBSNQ9H1K0 784 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 BSDC1Q9NW68 430 aaPredicted RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 ABI2Q9NYB9 513 aaPredicted RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 MAP3K2Q9Y2U5 619 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 BRCA2P51587 3418 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 NPR3P17342 541 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 KLRK1P26718 216 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 IGHMBP2P38935 993 aaKnown RBP7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 KCNJ4P48050 445 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 LDLRAD1Q5T700 205 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 PDE12Q6L8Q7 609 aaKnown RBP7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 TXNRD3Q86VQ6 643 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 TMEM151AQ8N4L1 468 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 TTLL11Q8NHH1 800 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 DEFB129Q9H1M3 183 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 SUV39H2Q9H5I1 410 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 ELP3Q9H9T3 547 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 TMEM63CQ9P1W3 806 aa7.67□□□□□ -1.18
SEMA3D-204ENST00000484038 RBBP6Q7Z6E9 1792 aaKnown RBP7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 SSC5DA1L4H1 1573 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 ZNF804BA4D1E1 1349 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 J3QW42 95 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 IGF2BP3O00425 579 aaKnown RBP eCLIP7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 SOX18P35713 384 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 USP5P45974 858 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 NEXNQ0ZGT2 675 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 DLGAP5Q15398 846 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 UBE3BQ7Z3V4 1068 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 CD99L2Q8TCZ2 262 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 ERO1AQ96HE7 468 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 WNK4Q96J92 1243 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 CLMNQ96JQ2 1002 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 BIN2Q9UBW5 565 aaPredicted RBP7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 BRPF3Q9ULD4 1205 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 LEMD3Q9Y2U8 911 aa7.66□□□□□ -1.18
SEMA3D-204ENST00000484038 ECM29Q5VYK3 1845 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 LAMB1P07942 1786 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 CLRN2A0PK11 232 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 PI4KAP2A4QPH2 592 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 F8W031 263 aaPredicted RBP7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 FZD6O60353 706 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 ZNF853P0CG23 659 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 ZBTB48P10074 688 aaPredicted RBP7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 EN2P19622 333 aaPredicted RBP7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 MMP14P50281 582 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 INHBEP58166 350 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 GNAI1P63096 354 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 CRHR2Q13324 411 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 CWF19L2Q2TBE0 894 aaKnown RBP7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 PERM1Q5SV97 790 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 CCDC30Q5VVM6 783 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 PI4KAP1Q8N8J0 262 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 C8orf58Q8NAV2 365 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 OR13H1Q8NG92 308 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 MPHOSPH8Q99549 860 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 PLVAPQ9BX97 442 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 SMG9Q9H0W8 520 aaKnown RBP7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 VEZTQ9HBM0 779 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 IFT57Q9NWB7 429 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 PTPN22Q9Y2R2 807 aa7.65□□□□□ -1.18
SEMA3D-204ENST00000484038 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 NDUFB5O43674 189 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 MYO1BO43795 1136 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 HYAL2Q12891 473 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 OTUD7BQ6GQQ9 843 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 KSR2Q6VAB6 950 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 C20orf204Q6ZNR8 217 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 TRIM11Q96F44 468 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 LPIN3Q9BQK8 851 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 ANKRD2Q9GZV1 360 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 KANSL3Q9P2N6 904 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 PCDHAC2Q9Y5I4 1007 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
SEMA3D-204ENST00000484038 RBM5P52756 815 aaKnown RBP eCLIP7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 CHRNDQ07001 517 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 EHHADHQ08426 723 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 MAP3K11Q16584 847 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 SUPT20HL1Q3ZLR7 823 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 CFAP100Q494V2 611 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 NCAPG2Q86XI2 1143 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 CERS5Q8N5B7 392 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 ZBED3Q96IU2 234 aaPredicted RBP7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 STK31Q9BXU1 1019 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 CD209Q9NNX6 404 aa7.63□□□□□ -1.19
SEMA3D-204ENST00000484038 FRRS1LQ9P0K9 344 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms