RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 INHBEP58166 350 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 IRX3P78415 501 aaPredicted RBP10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 SREBF2Q12772 1141 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 CCL15Q16663 113 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 TTBK2Q6IQ55 1244 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 MAMSTRQ6ZN01 415 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 CATSPERGQ6ZRH7 1159 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 HOMER1Q86YM7 354 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 ADGRF4Q8IZF3 695 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 GTF3C2Q8WUA4 911 aaPredicted RBP10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 MTMR8Q96EF0 704 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 DDX11Q96FC9 970 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 UBA5Q9GZZ9 404 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 ZCCHC17Q9NP64 241 aaKnown RBP10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 CTDP1Q9Y5B0 961 aaPredicted RBP10.43□□□□□ -0.74
SHROOM4-204ENST00000483955 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 ZBTB5O15062 677 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 SCG2P13521 617 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 SLC16A2P36021 539 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 DGKZQ13574 1117 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 TRIM29Q14134 588 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 COG2Q14746 738 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 CDC37Q16543 378 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 PFKFB3Q16875 520 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 TREML2Q5T2D2 321 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 ANKRD23Q86SG2 305 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 CCDC148Q8NFR7 591 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 CCDC12Q8WUD4 166 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 KIFC2Q96AC6 838 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 MS4A4AQ96JQ5 239 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 ALG1Q9BT22 464 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 RANBP17Q9H2T7 1088 aaKnown RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 JMJD4Q9H9V9 463 aa10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 CIZ1Q9ULV3 898 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 V9GY48 417 aaPredicted RBP10.42□□□□□ -0.74
SHROOM4-204ENST00000483955 ATMINO43313 823 aaPredicted RBP10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 ZBED4O75132 1171 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 FDPSP14324 419 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 OAZ1P54368 228 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 NOGQ13253 232 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 MOGSQ13724 837 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 QRICH1Q2TAL8 776 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 DEFB115Q30KQ5 88 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 OTUD7BQ6GQQ9 843 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 PPP1R18Q6NYC8 613 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 LBX2Q6XYB7 198 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 C8orf76Q96K31 380 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 PIGSQ96S52 555 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 AMNQ9BXJ7 453 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 CPVLQ9H3G5 476 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 VAT1LQ9HCJ6 419 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 SH3GLB2Q9NR46 395 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 FBXO28Q9NVF7 368 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 HOXC10Q9NYD6 342 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 PARP14Q460N5 1801 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 A0A0G2JMZ2 1700 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 MYH6P13533 1939 aa10.41□□□□□ -0.74
SHROOM4-204ENST00000483955 SPDYE16A6NNV3 312 aaPredicted RBP10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 FAM155AB1AL88 458 aaPredicted RBP10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 H3BQV1 296 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 PKN1Q16512 942 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 SLC35G1Q2M3R5 365 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 LARP1BQ659C4 914 aaKnown RBP10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 GPAT2Q6NUI2 795 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 HEATR3Q7Z4Q2 680 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 FBXO11Q86XK2 927 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 TEX2Q8IWB9 1127 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 BRI3BPQ8WY22 251 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 GLT8D2Q9H1C3 349 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 ASCC2Q9H1I8 757 aaPredicted RBP10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 SLC38A10Q9HBR0 1119 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 BRMS1Q9HCU9 246 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 BARHL2Q9NY43 387 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 ADAMTS5Q9UNA0 930 aa10.4□□□□□ -0.74
SHROOM4-204ENST00000483955 ABCB11O95342 1321 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 ESYT2A0FGR8 921 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 BTBD19C9JJ37 291 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 PDHXO00330 501 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 VWA5AO00534 786 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 ATP2A1O14983 1001 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 STX6O43752 255 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 ICAM1P05362 532 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 CALML3P27482 149 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 COPB2P35606 906 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 NAPAP54920 295 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 HERVK_113P62684 666 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 NUCB2P80303 420 aa10.39□□□□□ -0.75
SHROOM4-204ENST00000483955 SAFBQ15424 915 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms