RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 VWCEQ96DN2 955 aa4.45□□□□□ -1.7
PKP4-212ENST00000483881 TMEM87BQ96K49 555 aa4.45□□□□□ -1.7
PKP4-212ENST00000483881 USP35Q9P2H5 1018 aa4.45□□□□□ -1.7
PKP4-212ENST00000483881 REV1Q9UBZ9 1251 aa4.45□□□□□ -1.7
PKP4-212ENST00000483881 ST14Q9Y5Y6 855 aa4.45□□□□□ -1.7
PKP4-212ENST00000483881 CSADQ9Y600 493 aa4.45□□□□□ -1.7
PKP4-212ENST00000483881 SYNJ2O15056 1496 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 ERCC6Q03468 1493 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 FAM155AB1AL88 458 aaPredicted RBP4.44□□□□□ -1.7
PKP4-212ENST00000483881 RAG1P15918 1043 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 GTF2F1P35269 517 aaKnown RBP eCLIP4.44□□□□□ -1.7
PKP4-212ENST00000483881 PDE6BP35913 854 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 CASP7P55210 303 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 UBXN11Q5T124 520 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 MPRIPQ6WCQ1 1025 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 FERMT3Q86UX7 667 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 PHACTR4Q8IZ21 702 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 LINC01356Q8N9X3 169 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 FBXO27Q8NI29 283 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 SMARCC1Q92922 1105 aaPredicted RBP4.44□□□□□ -1.7
PKP4-212ENST00000483881 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 TRIM55Q9BYV6 548 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 PCED1AQ9H1Q7 454 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 PRKAG3Q9UGI9 489 aa4.44□□□□□ -1.7
PKP4-212ENST00000483881 YBX2Q9Y2T7 364 aaKnown RBP4.44□□□□□ -1.7
PKP4-212ENST00000483881 RGS13O14921 159 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 GUCY2CP25092 1073 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 CRKP46108 304 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 RNF4P78317 190 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 CLCQ05315 142 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 NFE2L2Q16236 605 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 FXNQ16595 210 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.43□□□□□ -1.7
PKP4-212ENST00000483881 NLRC3Q7RTR2 1065 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 LRP10Q7Z4F1 713 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 TMEFF1Q8IYR6 380 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 PHAXQ9H814 394 aaKnown RBP4.43□□□□□ -1.7
PKP4-212ENST00000483881 CNNM2Q9H8M5 875 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 PRDM5Q9NQX1 630 aaPredicted RBP4.43□□□□□ -1.7
PKP4-212ENST00000483881 SIRPGQ9P1W8 387 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 KCNH3Q9ULD8 1083 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 CEP131Q9UPN4 1083 aa4.43□□□□□ -1.7
PKP4-212ENST00000483881 TNFRSF10CO14798 259 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 FGRP09769 529 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 NME1P15531 152 aaKnown RBP4.42□□□□□ -1.7
PKP4-212ENST00000483881 ZNF20P17024 532 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 KIR3DL1P43629 444 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 NCAPHQ15003 741 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 CNKSR3Q6P9H4 555 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 MCF2L2Q86YR7 1114 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 CYB5D2Q8WUJ1 264 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 MKL1Q969V6 931 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 ACSF2Q96CM8 615 aaPredicted RBP4.42□□□□□ -1.7
PKP4-212ENST00000483881 ANAPC16Q96DE5 110 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 ATG4CQ96DT6 458 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 SHDQ96IW2 340 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 PKNOX2Q96KN3 472 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 C1QTNF3Q9BXJ4 246 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
PKP4-212ENST00000483881 CWC22Q9HCG8 908 aaKnown RBP4.42□□□□□ -1.7
PKP4-212ENST00000483881 TJP2Q9UDY2 1190 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 KLHL3Q9UH77 587 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 MAPK8IP1Q9UQF2 711 aa4.42□□□□□ -1.7
PKP4-212ENST00000483881 POLR3KQ9Y2Y1 108 aaPredicted RBP4.42□□□□□ -1.7
PKP4-212ENST00000483881 RBAK-RBAKDNI3L0D1 243 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 CLEC3AO75596 197 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 ESR1P03372 595 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 ZNF143P52747 638 aaPredicted RBP4.41□□□□□ -1.7
PKP4-212ENST00000483881 SLBPQ14493 270 aaKnown RBP eCLIP4.41□□□□□ -1.7
PKP4-212ENST00000483881 PPP2R5EQ16537 467 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 ARSHQ5FYA8 562 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 TAF7LQ5H9L4 462 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 CRIP3Q6Q6R5 217 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 EPN3Q9H201 632 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 ACTR10Q9NZ32 417 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 ZSWIM5Q9P217 1185 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 PPT2Q9UMR5 302 aa4.41□□□□□ -1.7
PKP4-212ENST00000483881 CDK11AQ9UQ88 783 aaPredicted RBP4.41□□□□□ -1.7
PKP4-212ENST00000483881 CHURC1-FNTBB4DL54 471 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 IRS4O14654 1257 aaPredicted RBP4.4□□□□□ -1.71
PKP4-212ENST00000483881 N4BP3O15049 544 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 KCNC1P48547 511 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
PKP4-212ENST00000483881 TCEAL1Q15170 157 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 SFRP5Q5T4F7 317 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 PRAMEF13Q5VWM6 474 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 LETMD1Q6P1Q0 360 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 ARMCX6Q7L4S7 300 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 THAP5Q7Z6K1 395 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 FAM129CQ86XR2 697 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 LILRA2Q8N149 483 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 ENOX1Q8TC92 643 aaKnown RBP4.4□□□□□ -1.71
PKP4-212ENST00000483881 ASPNQ9BXN1 380 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 C11orf21Q9P2W6 132 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 TPX2Q9ULW0 747 aaKnown RBP4.4□□□□□ -1.71
PKP4-212ENST00000483881 CORINQ9Y5Q5 1042 aa4.4□□□□□ -1.71
PKP4-212ENST00000483881 IQCA1LA6NCM1 817 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 AGRPO00253 132 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 CLSTN1O94985 981 aa4.39□□□□□ -1.71
PKP4-212ENST00000483881 CDK8P49336 464 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms