RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 REXO1Q8N1G1 1221 aaKnown RBP29.93■■■□□ 2.38
SHOX2-204ENST00000483851 CLIC6Q96NY7 704 aa29.93■■■□□ 2.38
SHOX2-204ENST00000483851 ADAMTS3O15072 1205 aa29.93■■■□□ 2.38
SHOX2-204ENST00000483851 SLC16A2P36021 539 aa29.93■■■□□ 2.38
SHOX2-204ENST00000483851 ADCY7P51828 1080 aa29.93■■■□□ 2.38
SHOX2-204ENST00000483851 SASS6Q6UVJ0 657 aa29.93■■■□□ 2.38
SHOX2-204ENST00000483851 SDF4Q9BRK5 362 aa29.93■■■□□ 2.38
SHOX2-204ENST00000483851 RAD21O60216 631 aa29.92■■■□□ 2.38
SHOX2-204ENST00000483851 NONOQ15233 471 aaKnown RBP eCLIP29.92■■■□□ 2.38
SHOX2-204ENST00000483851 ZNF174Q15697 407 aa29.92■■■□□ 2.38
SHOX2-204ENST00000483851 RIC8AQ9NPQ8 531 aa29.92■■■□□ 2.38
SHOX2-204ENST00000483851 PPP2R3BQ9Y5P8 575 aa29.92■■■□□ 2.38
SHOX2-204ENST00000483851 TYRO3Q06418 890 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 ZSCAN30Q86W11 494 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 CKAP2LQ8IYA6 745 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 KCNH3Q9ULD8 1083 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 LAD1O00515 517 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 PTGDRQ13258 359 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 DCAF15Q66K64 600 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 TEX2Q8IWB9 1127 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 ATAD5Q96QE3 1844 aa29.91■■■□□ 2.38
SHOX2-204ENST00000483851 CTNND1O60716 968 aaKnown RBP29.9■■■□□ 2.38
SHOX2-204ENST00000483851 PLA2G6O60733 806 aa29.9■■■□□ 2.38
SHOX2-204ENST00000483851 MRPL12P52815 198 aaKnown RBP29.9■■■□□ 2.38
SHOX2-204ENST00000483851 TRAF1Q13077 416 aa29.9■■■□□ 2.38
SHOX2-204ENST00000483851 RASGRP4Q8TDF6 673 aa29.9■■■□□ 2.38
SHOX2-204ENST00000483851 COA7Q96BR5 231 aa29.9■■■□□ 2.38
SHOX2-204ENST00000483851 VCPKMTQ9H867 229 aa29.9■■■□□ 2.38
SHOX2-204ENST00000483851 PPP1R11O60927 126 aaPredicted RBP29.89■■■□□ 2.38
SHOX2-204ENST00000483851 SYDE2Q5VT97 1194 aa29.89■■■□□ 2.38
SHOX2-204ENST00000483851 WNT7AO00755 349 aa29.89■■■□□ 2.37
SHOX2-204ENST00000483851 SOCS7O14512 581 aa29.89■■■□□ 2.37
SHOX2-204ENST00000483851 ECE1P42892 770 aa29.89■■■□□ 2.37
SHOX2-204ENST00000483851 CDC37Q16543 378 aaPredicted RBP29.89■■■□□ 2.37
SHOX2-204ENST00000483851 QRICH1Q2TAL8 776 aa29.89■■■□□ 2.37
SHOX2-204ENST00000483851 ACER1Q8TDN7 264 aa29.89■■■□□ 2.37
SHOX2-204ENST00000483851 CUL5Q93034 780 aa29.89■■■□□ 2.37
SHOX2-204ENST00000483851 TMEM232C9JQI7 657 aa29.88■■■□□ 2.37
SHOX2-204ENST00000483851 INF2Q27J81 1249 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 MCTP2Q6DN12 878 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 CSRNP2Q9H175 543 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 ASTN2O75129 1339 aaPredicted RBP29.87■■■□□ 2.37
SHOX2-204ENST00000483851 MCM7P33993 719 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 STAT2P52630 851 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 C4orf32Q8N8J7 132 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 AMNQ9BXJ7 453 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 MRVI1Q9Y6F6 885 aa29.87■■■□□ 2.37
SHOX2-204ENST00000483851 PITPNM2Q9BZ72 1349 aa29.86■■■□□ 2.37
SHOX2-204ENST00000483851 ANGEL2Q5VTE6 544 aaKnown RBP29.86■■■□□ 2.37
SHOX2-204ENST00000483851 NEK8Q86SG6 692 aa29.86■■■□□ 2.37
SHOX2-204ENST00000483851 CHURC1Q8WUH1 139 aa29.86■■■□□ 2.37
SHOX2-204ENST00000483851 ZNF341Q9BYN7 854 aa29.86■■■□□ 2.37
SHOX2-204ENST00000483851 PRPHP41219 470 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 CLK2P49760 499 aaKnown RBP29.85■■■□□ 2.37
SHOX2-204ENST00000483851 GRIN1Q05586 938 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 TRPM4Q8TD43 1214 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 KIAA1468Q9P260 1216 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 HOOK1Q9UJC3 728 aaKnown RBP29.85■■■□□ 2.37
SHOX2-204ENST00000483851 IKQ13123 557 aaPredicted RBP29.85■■■□□ 2.37
SHOX2-204ENST00000483851 FAM160B2Q86V87 743 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 NUP88Q99567 741 aaPredicted RBP29.85■■■□□ 2.37
SHOX2-204ENST00000483851 PYM1Q9BRP8 204 aaKnown RBP29.85■■■□□ 2.37
SHOX2-204ENST00000483851 RNF181Q9P0P0 153 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 ZNF112Q9UJU3 913 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 PCDHA1Q9Y5I3 950 aa29.85■■■□□ 2.37
SHOX2-204ENST00000483851 KANK3Q6NY19 840 aa29.84■■■□□ 2.37
SHOX2-204ENST00000483851 KRBA2Q6ZNG9 492 aa29.84■■■□□ 2.37
SHOX2-204ENST00000483851 FAM200AQ8TCP9 573 aa29.84■■■□□ 2.37
SHOX2-204ENST00000483851 PSTPIP2Q9H939 334 aa29.84■■■□□ 2.37
SHOX2-204ENST00000483851 BIN2Q9UBW5 565 aaPredicted RBP29.84■■■□□ 2.37
SHOX2-204ENST00000483851 LONP1P36776 959 aaKnown RBP29.83■■■□□ 2.37
SHOX2-204ENST00000483851 STX1AQ16623 288 aa29.83■■■□□ 2.37
SHOX2-204ENST00000483851 NBPF12Q5TAG4 269 aaPredicted RBP29.83■■■□□ 2.37
SHOX2-204ENST00000483851 CCDC34Q96HJ3 373 aa29.83■■■□□ 2.37
SHOX2-204ENST00000483851 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.83■■■□□ 2.37
SHOX2-204ENST00000483851 YBX3P16989 372 aaKnown RBP eCLIP29.82■■■□□ 2.37
SHOX2-204ENST00000483851 LMOD1P29536 600 aaPredicted RBP29.82■■■□□ 2.37
SHOX2-204ENST00000483851 EPS15P42566 896 aa29.82■■■□□ 2.37
SHOX2-204ENST00000483851 FBXO11Q86XK2 927 aa29.82■■■□□ 2.37
SHOX2-204ENST00000483851 LPAR1Q92633 364 aa29.82■■■□□ 2.37
SHOX2-204ENST00000483851 USP25Q9UHP3 1055 aa29.82■■■□□ 2.37
SHOX2-204ENST00000483851 PRR12Q9ULL5 1215 aa29.82■■■□□ 2.37
SHOX2-204ENST00000483851 SPICE1Q8N0Z3 855 aa29.82■■■□□ 2.36
SHOX2-204ENST00000483851 TBCKQ8TEA7 893 aa29.82■■■□□ 2.36
SHOX2-204ENST00000483851 KIAA1683Q9H0B3 1180 aa29.82■■■□□ 2.36
SHOX2-204ENST00000483851 ADARB2Q9NS39 739 aaKnown RBP29.82■■■□□ 2.36
SHOX2-204ENST00000483851 ANO10Q9NW15 660 aa29.82■■■□□ 2.36
SHOX2-204ENST00000483851 FEM1BQ9UK73 627 aa29.82■■■□□ 2.36
SHOX2-204ENST00000483851 JAKMIP3Q5VZ66 844 aa29.81■■■□□ 2.36
SHOX2-204ENST00000483851 CNNM3Q8NE01 707 aa29.81■■■□□ 2.36
SHOX2-204ENST00000483851 SCAF8Q9UPN6 1271 aaKnown RBP29.81■■■□□ 2.36
SHOX2-204ENST00000483851 KIAA1755Q5JYT7 1200 aa29.8■■■□□ 2.36
SHOX2-204ENST00000483851 FAM83BQ5T0W9 1011 aa29.8■■■□□ 2.36
SHOX2-204ENST00000483851 NAP1L4Q99733 375 aaKnown RBP29.8■■■□□ 2.36
SHOX2-204ENST00000483851 GGA3Q9NZ52 723 aa29.8■■■□□ 2.36
SHOX2-204ENST00000483851 DOCK1Q14185 1865 aa29.8■■■□□ 2.36
SHOX2-204ENST00000483851 VWA3AA6NCI4 1184 aa29.8■■■□□ 2.36
SHOX2-204ENST00000483851 HIRAP54198 1017 aaPredicted RBP29.8■■■□□ 2.36
SHOX2-204ENST00000483851 LONRF3Q496Y0 759 aa29.8■■■□□ 2.36
SHOX2-204ENST00000483851 SPECC1Q5M775 1068 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms