RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 SASH3O75995 380 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 LIG1P18858 919 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 RTN1Q16799 776 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 TMEM47Q9BQJ4 181 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 ZNF236Q9UL36 1845 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 CLRN2A0PK11 232 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 SCRN1Q12765 414 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 NSUN7Q8NE18 718 aaKnown RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 HHIPL1Q96JK4 782 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 SLC45A1Q9Y2W3 748 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 SKILP12757 684 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 PNMA1Q8ND90 353 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 TMEM39BQ9GZU3 492 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 GLT8D2Q9H1C3 349 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
EWSR1-217ENST00000483415 ZCCHC17Q9NP64 241 aaKnown RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
EWSR1-217ENST00000483415 SHTN1A0MZ66 631 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 GOLGA8AA7E2F4 631 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 GOLGA8BA8MQT2 603 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 KIF2AO00139 706 aaPredicted RBP12.27□□□□□ -0.44
EWSR1-217ENST00000483415 APOBRQ0VD83 1088 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 FUT2Q10981 343 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 NBPF11Q86T75 865 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 FAM160B2Q86V87 743 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.44
EWSR1-217ENST00000483415 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.44
EWSR1-217ENST00000483415 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.44
EWSR1-217ENST00000483415 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
EWSR1-217ENST00000483415 TBC1D8O95759 1140 aa12.27□□□□□ -0.45
EWSR1-217ENST00000483415 EGFRP00533 1210 aa12.27□□□□□ -0.45
EWSR1-217ENST00000483415 ATP2B1P20020 1258 aa12.27□□□□□ -0.45
EWSR1-217ENST00000483415 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.45
EWSR1-217ENST00000483415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.27□□□□□ -0.45
EWSR1-217ENST00000483415 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
EWSR1-217ENST00000483415 MRFAP1L1Q96HT8 127 aa12.27□□□□□ -0.45
EWSR1-217ENST00000483415 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 DEXIO95424 95 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 OAS2P29728 719 aaKnown RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 LDLRAD1Q5T700 205 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 NFXL1Q6ZNB6 911 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.26□□□□□ -0.455e-9■■■■□ 21.4
EWSR1-217ENST00000483415 PPP1R12BO60237 982 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 MAP3K9P80192 1104 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 ICA1Q05084 483 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 PPATQ06203 517 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 CAMK4Q16566 473 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 ARMC9Q7Z3E5 817 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 DHX37Q8IY37 1157 aaKnown RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 DAGLBQ8NCG7 672 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 CDCA5Q96FF9 252 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 SMC3Q9UQE7 1217 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 CXCL11O14625 94 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 WDR46O15213 610 aaKnown RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 GSCP56915 257 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 TCP10Q12799 353 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 IQCB1Q15051 598 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 RRP12Q5JTH9 1297 aaKnown RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 TRMT1Q9NXH9 659 aaKnown RBP12.26□□□□□ -0.45
EWSR1-217ENST00000483415 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
EWSR1-217ENST00000483415 PDHBP11177 359 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 MAGEA9P43362 315 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 GHRHRQ02643 423 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 ZNF543Q08ER8 600 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 TMCO3Q6UWJ1 677 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 FILIP1Q7Z7B0 1213 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 TRIM22Q8IYM9 498 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 ANKRD13AQ8IZ07 590 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 EXOC4Q96A65 974 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 TOMM22Q9NS69 142 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 USP2O75604 605 aaPredicted RBP12.25□□□□□ -0.45
EWSR1-217ENST00000483415 SEC31AO94979 1220 aaKnown RBP12.25□□□□□ -0.45
EWSR1-217ENST00000483415 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
EWSR1-217ENST00000483415 LARGE1O95461 756 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CTDNEP1O95476 244 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 PARP1P09874 1014 aaKnown RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CPA1P15085 419 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CACNB3P54284 484 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 GPS2Q13227 327 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 ORC2Q13416 577 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-217ENST00000483415 FAM47AQ5JRC9 791 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 LBX2Q6XYB7 198 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 EP400NLQ6ZTU2 488 aa12.24□□□□□ -0.45
EWSR1-217ENST00000483415 SIAH1Q8IUQ4 282 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms