RNA–Protein interactions for RNA: ENST00000483148.5

APTX-226, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,764 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-226ENST00000483148 PHKA1P46020 1223 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 MTFR1Q15390 333 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 CCL15Q16663 113 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 SLC17A8Q8NDX2 589 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
APTX-226ENST00000483148 SMARCC2Q8TAQ2 1214 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 DPF3Q92784 378 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
APTX-226ENST00000483148 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 L1RE1Q9UN81 338 aa11.45□□□□□ -0.58
APTX-226ENST00000483148 STX10O60499 249 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 ARID4AP29374 1257 aaPredicted RBP11.44□□□□□ -0.58
APTX-226ENST00000483148 RBM5P52756 815 aaKnown RBP eCLIP11.44□□□□□ -0.58
APTX-226ENST00000483148 CHMP4BP1P59074 171 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 VGLL4Q14135 290 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 NCAPHQ15003 741 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 ARHGEF6Q15052 776 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 ADALQ6DHV7 355 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 VPS37DQ86XT2 251 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 STAG1Q8WVM7 1258 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 KIFC2Q96AC6 838 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 PRO3102Q9H379 93 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
APTX-226ENST00000483148 A1CFQ9NQ94 594 aaKnown RBP11.44□□□□□ -0.58
APTX-226ENST00000483148 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 BRCA2P51587 3418 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 FANCGO15287 622 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 CTGFP29279 349 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 GTF2A2P52657 109 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 FKBP1AP62942 108 aaKnown RBP11.44□□□□□ -0.58
APTX-226ENST00000483148 SATB1Q01826 763 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 VSTM4Q8IW00 320 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
APTX-226ENST00000483148 MYH13Q9UKX3 1938 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 SEMA3EO15041 775 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 CUTAO60888 179 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 ERLIN2O94905 339 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
APTX-226ENST00000483148 UBASH3AP57075 661 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 LACTBP83111 547 aaPredicted RBP11.43□□□□□ -0.58
APTX-226ENST00000483148 SETQ01105 290 aaPredicted RBP11.43□□□□□ -0.58
APTX-226ENST00000483148 SART3Q15020 963 aaKnown RBP11.43□□□□□ -0.58
APTX-226ENST00000483148 CNNM3Q8NE01 707 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.43□□□□□ -0.58
APTX-226ENST00000483148 TMEM39BQ9GZU3 492 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 EPC1Q9H2F5 836 aa11.43□□□□□ -0.58
APTX-226ENST00000483148 GNL3LQ9NVN8 582 aaKnown RBP11.43□□□□□ -0.58
APTX-226ENST00000483148 PDS5AQ29RF7 1337 aaKnown RBP11.43□□□□□ -0.58
APTX-226ENST00000483148 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 BTBD19C9JJ37 291 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 TLR2O60603 784 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
APTX-226ENST00000483148 UQCRFS1P1P0C7P4 283 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 RASGRF1Q13972 1273 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 MCM6Q14566 821 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 UBE2Q1Q7Z7E8 422 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 TMEM139Q8IV31 216 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 MICALL1Q8N3F8 863 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.42□□□□□ -0.58
APTX-226ENST00000483148 RTEL1Q9NZ71 1219 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 SUFUQ9UMX1 484 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
APTX-226ENST00000483148 ATP5JP18859 108 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 MCM3P25205 808 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 MCAMP43121 646 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 ME1P48163 572 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 AARSP49588 968 aaKnown RBP eCLIP11.41□□□□□ -0.58
APTX-226ENST00000483148 DPCR1Q3MIW9 517 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 TTC39AQ5SRH9 613 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 DHX58Q96C10 678 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 WDR24Q96S15 920 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 BAG1Q99933 345 aaPredicted RBP11.41□□□□□ -0.58
APTX-226ENST00000483148 ANKZF1Q9H8Y5 726 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 CDC23Q9UJX2 597 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 IQSEC3Q9UPP2 1182 aaPredicted RBP11.41□□□□□ -0.58
APTX-226ENST00000483148 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
APTX-226ENST00000483148 CALRP27797 417 aaKnown RBP11.41□□□□□ -0.58
APTX-226ENST00000483148 CASP8Q14790 479 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 GRIK5Q16478 980 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 KCNG4Q8TDN1 519 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
APTX-226ENST00000483148 ATXN2Q99700 1313 aaKnown RBP11.4□□□□□ -0.58
APTX-226ENST00000483148 SZT2Q5T011 3432 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 JAK2O60674 1132 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 PFKFB2O60825 505 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 YEATS4O95619 227 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 SERPINC1P01008 464 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 TDO2P48775 406 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 MYL5Q02045 173 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 TBX2Q13207 712 aaPredicted RBP11.4□□□□□ -0.58
APTX-226ENST00000483148 KIF22Q14807 665 aa11.4□□□□□ -0.58
APTX-226ENST00000483148 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms