RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CDKAL1Q5VV42 579 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 SMIM5Q71RC9 77 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 OTUD6BQ8N6M0 293 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 MSANTD4Q8NCY6 345 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 LRRC1Q9BTT6 524 aa14.18□□□□□ -0.14
VPS52-218ENST00000482399 MROH5Q6ZUA9 1318 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 PPFIA4O75335 1185 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 TUBBP07437 444 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 INPP5BP32019 993 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 MAGEA9P43362 315 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 SUSD4Q5VX71 490 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 BLIDQ8IZY5 108 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 PROCA1Q8NCQ7 364 aaPredicted RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 COG1Q8WTW3 980 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 TMCO5BA8MYB1 307 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 FCER1AP12319 257 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 FBXW10Q5XX13 1052 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 PACS2Q86VP3 889 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 HPCAL4Q9UM19 191 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 GOLGA6L10A6NI86 522 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 KRT18P05783 430 aaKnown RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 DNM2P50570 870 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 HSPA2P54652 639 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 CFAP58Q5T655 872 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 ZNF444Q8N0Y2 327 aaPredicted RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 HNRNPLLQ8WVV9 542 aaKnown RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 RBM28Q9NW13 759 aaKnown RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 DMGDHQ9UI17 866 aaKnown RBP14.17□□□□□ -0.14
VPS52-218ENST00000482399 CAPN7Q9Y6W3 813 aa14.17□□□□□ -0.14
VPS52-218ENST00000482399 TCRBV5S4A2TA0A5A2 114 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 VAV2P52735 878 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 TUBB4BP68371 445 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
VPS52-218ENST00000482399 NALCNQ8IZF0 1738 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 FAM237AA0A1B0GTK4 181 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 TSPY3P0CV98 308 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 TSPY8P0CW00 308 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
VPS52-218ENST00000482399 GUCY2DQ02846 1103 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 PKN1Q16512 942 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 NT5DC1Q5TFE4 455 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 CABP7Q86V35 215 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 DYNLL2Q96FJ2 89 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 MS4A14Q96JA4 679 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 PHF20Q9BVI0 1012 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 RAB21Q9UL25 225 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 PACSIN2Q9UNF0 486 aaPredicted RBP14.16□□□□□ -0.14
VPS52-218ENST00000482399 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
VPS52-218ENST00000482399 UBR1Q8IWV7 1749 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 PDE2AO00408 941 aaPredicted RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 FTCDO95954 541 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 ICE2Q659A1 982 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 SPTY2D1Q68D10 685 aaPredicted RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 CADPS2Q86UW7 1296 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CRNKL1Q9BZJ0 848 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 PPANQ9NQ55 473 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 MYO1AQ9UBC5 1043 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 RCCD1A6NED2 376 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 LGALS16A8MUM7 142 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 KRT14P02533 472 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CALM1P0DP23 149 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CALM2P0DP24 149 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CALM3P0DP25 149 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 EIF4A3P38919 411 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 EIF6P56537 245 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 APTXQ7Z2E3 356 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 NELFCDQ8IXH7 590 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 STAG2Q8N3U4 1231 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 DISC1Q9NRI5 854 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 BTG4Q9NY30 223 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 LIMA1Q9UHB6 759 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 BACH1O14867 736 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 OPA1O60313 960 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 USP17L8P0C7I0 530 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CALML3P27482 149 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 RDXP35241 583 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 HERVK_113P62684 666 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 ATP2C1P98194 919 aaPredicted RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 TMTC3Q6ZXV5 915 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 CCDC43Q96MW1 224 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 TMEM60Q9H2L4 133 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 PSD3Q9NYI0 1048 aa14.15□□□□□ -0.14
VPS52-218ENST00000482399 REXO2Q9Y3B8 237 aaKnown RBP14.15□□□□□ -0.14
VPS52-218ENST00000482399 PLCG1P19174 1290 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 PRPF4BQ13523 1007 aaKnown RBP14.14□□□□□ -0.15
VPS52-218ENST00000482399 TAF4BQ92750 862 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 TRIM31Q9BZY9 425 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 LTN1O94822 1766 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 USP17L3A6NCW0 530 aa14.14□□□□□ -0.15
VPS52-218ENST00000482399 USP17L4A6NCW7 530 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms