RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 LRRC37A2A6NM11 1700 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 SNAI1O95863 264 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 HSPD1P10809 573 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 NUCB1Q02818 461 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 TKFCQ3LXA3 575 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 C1orf53Q5VUE5 145 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 GPR153Q6NV75 609 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 FGD4Q96M96 766 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 ACAD9Q9H845 621 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
CTDSP1-208ENST00000482272 MCM3APO60318 1980 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 PGK1P00558 417 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 NOVP48745 357 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 SNX17Q15036 470 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 RRP12Q5JTH9 1297 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 KCTD1Q719H9 257 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 LENG1Q96BZ8 264 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 ZHX1Q9UKY1 873 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 SUPT16HQ9Y5B9 1047 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 ZNF536O15090 1300 aa15.88■□□□□ 0.13
CTDSP1-208ENST00000482272 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 SDSP20132 328 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 SNAP25P60880 206 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 TRIM60Q495X7 471 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 MFSD6Q6ZSS7 791 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 DCAF4Q8WV16 495 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 AGBL1Q96MI9 1066 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 TRERF1Q96PN7 1200 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 IL25Q9H293 177 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 OSBPL3Q9H4L5 887 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 PRDM5Q9NQX1 630 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 TCP11L1Q9NUJ3 509 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 CCDC171Q6TFL3 1326 aa15.87■□□□□ 0.13
CTDSP1-208ENST00000482272 POTEB2H3BUK9 544 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 DUSP11O75319 330 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 TOP1P11387 765 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 ALAS1P13196 640 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 PDE4AP27815 886 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 HAND2P61296 217 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 CCDC174Q6PII3 467 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 NUP133Q8WUM0 1156 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 TTC14Q96N46 770 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 SPC25Q9HBM1 224 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 PRR12Q9ULL5 1215 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 ZMYM6O95789 1325 aa15.86■□□□□ 0.13
CTDSP1-208ENST00000482272 MOXD2PA6NHM9 499 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 ASB14A6NK59 587 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 ADCY6O43306 1168 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 ADAMTS4O75173 837 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 CCDC96Q2M329 555 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 AKNAD1Q5T1N1 836 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 ARMCX2Q7L311 632 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 TMEM47Q9BQJ4 181 aa15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 RNF41Q9H4P4 317 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-208ENST00000482272 A0A1W2PQ45 241 aaPredicted RBP15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 A0A1W2PQY0 241 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 HIP1O00291 1037 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 ZNF213O14771 459 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 ACLYP53396 1101 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 TLE2Q04725 743 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 CCDC144BQ3MJ40 725 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 FAM133AQ8N9E0 248 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 PCSK9Q8NBP7 692 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 KLHDC9Q8NEP7 349 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 A1CFQ9NQ94 594 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 STARD7Q9NQZ5 370 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 CCPG1Q9ULG6 757 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 DDX49Q9Y6V7 483 aaKnown RBP15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 ASTN1O14525 1302 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 NEDD4P46934 1319 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 SYNRGQ9UMZ2 1314 aa15.84■□□□□ 0.13
CTDSP1-208ENST00000482272 ICAM1P05362 532 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 C6orf222P0C671 652 aaPredicted RBP15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 CNTN2Q02246 1040 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 KCNA10Q16322 511 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 TTBK2Q6IQ55 1244 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 CWC27Q6UX04 472 aaKnown RBP15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 BTNL9Q6UXG8 535 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 DEFB123Q8N688 67 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 ESR2Q92731 530 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 BADQ92934 168 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 GLT1D1Q96MS3 346 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 TOX2Q96NM4 488 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 PDLIM7Q9NR12 457 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 DIAPH3Q9NSV4 1193 aa15.83■□□□□ 0.12
CTDSP1-208ENST00000482272 CLTBP09497 229 aa15.82■□□□□ 0.12
CTDSP1-208ENST00000482272 GSPT1P15170 499 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms