RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 GJA5P36382 358 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 MAP2K2P36507 400 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 GHRHRQ02643 423 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 IKQ13123 557 aaPredicted RBP9.52□□□□□ -0.89
SYNE1-225ENST00000481502 SAFBQ15424 915 aaKnown RBP eCLIP9.52□□□□□ -0.89
SYNE1-225ENST00000481502 DEFB115Q30KQ5 88 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 KIAA1755Q5JYT7 1200 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
SYNE1-225ENST00000481502 FBXO11Q86XK2 927 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 DAGLBQ8NCG7 672 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 PHKBQ93100 1093 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 C8orf76Q96K31 380 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 ALG1Q9BT22 464 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 TANGO6Q9C0B7 1094 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 UBA5Q9GZZ9 404 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 ZMYND12Q9H0C1 365 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 GPCPD1Q9NPB8 672 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 CHMP5Q9NZZ3 219 aa9.52□□□□□ -0.89
SYNE1-225ENST00000481502 ABT1Q9ULW3 272 aaKnown RBP9.52□□□□□ -0.89
SYNE1-225ENST00000481502 CTDP1Q9Y5B0 961 aaPredicted RBP9.52□□□□□ -0.89
SYNE1-225ENST00000481502 FRMPD2Q68DX3 1309 aaPredicted RBP9.52□□□□□ -0.89
SYNE1-225ENST00000481502 LOC285556D6RIA3 1793 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 CCL15-CCL14A0A0B4J2E2 113 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 FAM155AB1AL88 458 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 JAK2O60674 1132 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 SLC25A27O95847 323 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 MRPL12P52815 198 aaKnown RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 IRX3P78415 501 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 ZYXQ15942 572 aaKnown RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 CDC37Q16543 378 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 CCL15Q16663 113 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 SLC35G1Q2M3R5 365 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 ATL3Q6DD88 541 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 TTBK2Q6IQ55 1244 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 GPAT2Q6NUI2 795 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 GADL1Q6ZQY3 521 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 CCDC84Q86UT8 332 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 MCF2L2Q86YR7 1114 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 PIGSQ96S52 555 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 CFHR5Q9BXR6 569 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 FOXP1Q9H334 677 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 C6orf50Q9HD87 102 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 FBXO40Q9UH90 709 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 MRPL11Q9Y3B7 192 aaKnown RBP9.51□□□□□ -0.89
SYNE1-225ENST00000481502 RABGAP1Q9Y3P9 1069 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 ABCB11O95342 1321 aa9.51□□□□□ -0.89
SYNE1-225ENST00000481502 PTPRFP10586 1907 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 H3BQV1 296 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 PIK3CDO00329 1044 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 BRD1O95696 1058 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 FOSP01100 380 aaPredicted RBP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 MMP1P03956 469 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 U2AF2P26368 475 aaKnown RBP eCLIP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 QRICH1Q2TAL8 776 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 IFFO2Q5TF58 517 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 BRAPQ7Z569 592 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 CCDC82Q8N4S0 544 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 SHCBP1Q8NEM2 672 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 CHST13Q8NET6 341 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 BRI3BPQ8WY22 251 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 DDX11Q96FC9 970 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 PARK7Q99497 189 aaKnown RBP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 NUP88Q99567 741 aaPredicted RBP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 PHF20Q9BVI0 1012 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 TEX13BQ9BXU2 312 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 ASCC2Q9H1I8 757 aaPredicted RBP9.5□□□□□ -0.89
SYNE1-225ENST00000481502 VAT1LQ9HCJ6 419 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 MORF4L1Q9UBU8 362 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
SYNE1-225ENST00000481502 LOC102724159A0A0B4J2E5 919 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 BTBD19C9JJ37 291 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 STXBP3O00186 592 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 PDHXO00330 501 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 SLC16A2P36021 539 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 STAT3P40763 770 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 HERVK_113P62684 666 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 CCNA1P78396 465 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 AP3B2Q13367 1082 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 PWP2Q15269 919 aaKnown RBP9.49□□□□□ -0.89
SYNE1-225ENST00000481502 TREML2Q5T2D2 321 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 KRT40Q6A162 431 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 RIOX2Q8IUF8 465 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
SYNE1-225ENST00000481502 REPS2Q8NFH8 660 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 P2RX7Q99572 595 aaKnown RBP9.49□□□□□ -0.89
SYNE1-225ENST00000481502 RIC8AQ9NPQ8 531 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 ZNF214Q9UL59 606 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-225ENST00000481502 ISY1Q9ULR0 285 aaKnown RBP9.49□□□□□ -0.89
SYNE1-225ENST00000481502 PCDHA4Q9UN74 947 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 MTMR6Q9Y217 621 aa9.49□□□□□ -0.89
SYNE1-225ENST00000481502 SMCO2A6NFE2 343 aa9.48□□□□□ -0.89
SYNE1-225ENST00000481502 STRNO43815 780 aa9.48□□□□□ -0.89
SYNE1-225ENST00000481502 ZSCAN22P10073 491 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms