RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 MAEAQ7L5Y9 396 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 CCDC63Q8NA47 563 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 FBF1Q8TES7 1133 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 SLC7A3Q8WY07 619 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 NAPGQ99747 312 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 HESX1Q9UBX0 185 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 USP31Q70CQ4 1352 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 CYP27B1O15528 508 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 CNGA1P29973 690 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 POLGP54098 1239 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-216ENST00000481242 BPIFB4P59827 614 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 FAM102BQ5T8I3 360 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 ANKS4BQ8N8V4 417 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 SMC6Q96SB8 1091 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 DBNDD1Q9H9R9 158 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 SEC31BQ9NQW1 1179 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 CARMIL3Q8ND23 1372 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 PTCH1Q13635 1447 aa10.45□□□□□ -0.74
GARNL3-216ENST00000481242 PTPN12Q05209 780 aaKnown RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 PDZD4Q76G19 769 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 FNBP4Q8N3X1 1017 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 C1orf112Q9NSG2 853 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 FBXO40Q9UH90 709 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 ADORA1P30542 326 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 LIFRP42702 1097 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 STAT2P52630 851 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 PTH1RQ03431 593 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 TMEM179Q6ZVK1 233 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 DGKHQ86XP1 1220 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 SECISBP2LQ93073 1101 aaKnown RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 MAPK8IP1Q9UQF2 711 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 FRMPD2Q68DX3 1309 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 CLRN2A0PK11 232 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 A6NNZ2 444 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 TUBB8Q3ZCM7 444 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 LGSNQ5TDP6 509 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 TAOK1Q7L7X3 1001 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 POLA2Q14181 598 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 GBP6Q6ZN66 633 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 NELFCDQ8IXH7 590 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 GJD4Q96KN9 370 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 NACC1Q96RE7 527 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 BRIP1Q9BX63 1249 aa10.44□□□□□ -0.74
GARNL3-216ENST00000481242 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-216ENST00000481242 A0A1W2PQ27 194 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 A0A1W2PQ64 194 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 ZBTB16Q05516 673 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 ODR4Q5SWX8 454 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 ERO1AQ96HE7 468 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 ZNF277Q9NRM2 450 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-216ENST00000481242 ODF2LQ9ULJ1 636 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 PCDHA4Q9UN74 947 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 TMEM191BP0C7N4 346 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 FDX1P10109 184 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 TRIM28Q13263 835 aaKnown RBP10.43□□□□□ -0.74
GARNL3-216ENST00000481242 SUSD4Q5VX71 490 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 RPGRIP1Q96KN7 1286 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 RGS12O14924 1447 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 hCG_1642624A0A1W2PR95 340 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 IFNAR1P17181 557 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 TECP42680 631 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 SERTAD1Q9UHV2 236 aa10.43□□□□□ -0.74
GARNL3-216ENST00000481242 IQGAP3Q86VI3 1631 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 K7ENM7 598 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 RAD17O75943 681 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 MTX1Q13505 466 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 NKIRAS1Q9NYS0 192 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 PHLPP2Q6ZVD8 1323 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 GOLGA6CA6NDK9 693 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 GOLGA6BA6NDN3 693 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 GOLGA6DP0CG33 693 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 PFKFB1P16118 471 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 CRB1P82279 1406 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 SEPT2Q15019 361 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 MIS18BP1Q6P0N0 1132 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 OR8K1Q8NGG5 319 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 GSDMAQ96QA5 445 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 RPS6KC1Q96S38 1066 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 LSG1Q9H089 658 aaKnown RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 SUGCTQ9HAC7 445 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 IFT122Q9HBG6 1241 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 GOLGA6AQ9NYA3 693 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 ZNF215Q9UL58 517 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 UTP11Q9Y3A2 253 aaKnown RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 BTBD18B2RXH4 712 aa10.42□□□□□ -0.74
GARNL3-216ENST00000481242 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-216ENST00000481242 MAP2K2P36507 400 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms