RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 MCM4P33991 863 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 GK5Q6ZS86 529 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 GINM1Q9NU53 330 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 CASKIN1Q8WXD9 1431 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
CBX3-206ENST00000481057 DUOX2Q9NRD8 1548 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 COL9A2Q14055 689 aaPredicted RBP9.63□□□□□ -0.87
CBX3-206ENST00000481057 PRAMEF13Q5VWM6 474 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 SLC6A19Q695T7 634 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 MCATQ8IVS2 390 aaKnown RBP9.63□□□□□ -0.87
CBX3-206ENST00000481057 SHISA5Q8N114 240 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 SLC17A8Q8NDX2 589 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 FOXQ1Q9C009 403 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 TOPAZ1Q8N9V7 1692 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 OVOS2A0A0J9YW53 1432 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 OVOS2Q6IE36 1432 aa9.63□□□□□ -0.87
CBX3-206ENST00000481057 COL24A1Q17RW2 1714 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 SBF2Q86WG5 1849 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
CBX3-206ENST00000481057 DNAJA2O60884 412 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 CST3P01034 146 aaPredicted RBP9.62□□□□□ -0.87
CBX3-206ENST00000481057 F13BP05160 661 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 HSPA8P11142 646 aaKnown RBP9.62□□□□□ -0.87
CBX3-206ENST00000481057 SOX9P48436 509 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 ZC3H6P61129 1189 aaKnown RBP9.62□□□□□ -0.87
CBX3-206ENST00000481057 HABP4Q5JVS0 413 aaKnown RBP9.62□□□□□ -0.87
CBX3-206ENST00000481057 PRSS36Q5K4E3 855 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 FBXL6Q8N531 539 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 EFR3BQ9Y2G0 817 aa9.62□□□□□ -0.87
CBX3-206ENST00000481057 LMTK2Q8IWU2 1503 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 ITGB7P26010 798 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 GNL2Q13823 731 aaKnown RBP9.61□□□□□ -0.87
CBX3-206ENST00000481057 ZNF827Q17R98 1081 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 TOP6BLQ8N6T0 577 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 FAM13CQ8NE31 585 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 SHKBP1Q8TBC3 707 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 DPH2Q9BQC3 489 aaPredicted RBP9.61□□□□□ -0.87
CBX3-206ENST00000481057 ZNRF3Q9ULT6 936 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
CBX3-206ENST00000481057 FAM170BA6NMN3 283 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 FAM87AP0C7U9 286 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 ZDHHC13Q8IUH4 622 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 MFSD2AQ8NA29 543 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 SEC16BQ96JE7 1060 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 DUSP23Q9BVJ7 150 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 KLHL3Q9UH77 587 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 PPT2Q9UMR5 302 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 A0A0C4DFX4 3053 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
CBX3-206ENST00000481057 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 UPK3BL1B0FP48 263 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 UPK3BL2E5RIL1 263 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 LEFTY1O75610 366 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 NASPP49321 788 aaPredicted RBP9.59□□□□□ -0.87
CBX3-206ENST00000481057 YARSP54577 528 aaKnown RBP9.59□□□□□ -0.87
CBX3-206ENST00000481057 OGFOD3Q6PK18 319 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 SLFN12Q8IYM2 578 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 FERD3LQ96RJ6 166 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 PRDM11Q9NQV5 511 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 GMIPQ9P107 970 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 CD2APQ9Y5K6 639 aa9.59□□□□□ -0.87
CBX3-206ENST00000481057 MEIS3P2A8K0S8 358 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 CHURC1-FNTBB4DL54 471 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 SLITRK5O94991 958 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 IMPDH2P12268 514 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
CBX3-206ENST00000481057 OVOS1Q6IE37 1185 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 ZNF765Q7L2R6 523 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 TCP11L2Q8N4U5 519 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 SLC43A3Q8NBI5 491 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 MIPEPQ99797 713 aa9.58□□□□□ -0.88
CBX3-206ENST00000481057 C10orf71Q711Q0 1435 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 SLC22A31A6NKX4 558 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 CYP27A1Q02318 531 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 CPSF6Q16630 551 aaKnown RBP eCLIP9.57□□□□□ -0.88
CBX3-206ENST00000481057 NAALADL2Q58DX5 795 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 XAGE3Q8WTP9 111 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 TMEM40Q8WWA1 233 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
CBX3-206ENST00000481057 ATG3Q9NT62 314 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 SBNO1A3KN83 1393 aa9.57□□□□□ -0.88
CBX3-206ENST00000481057 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 PXDNLA1KZ92 1463 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 ADAM23O75077 832 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 LRRFIP1Q32MZ4 808 aaKnown RBP9.56□□□□□ -0.88
CBX3-206ENST00000481057 CCDC81Q6ZN84 652 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 CYB5D2Q8WUJ1 264 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 OSBPL1AQ9BXW6 950 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 ANTXR1Q9H6X2 564 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 PAPPAQ13219 1627 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
CBX3-206ENST00000481057 KDM2BQ8NHM5 1336 aa9.56□□□□□ -0.88
CBX3-206ENST00000481057 CYP27C1Q4G0S4 372 aa9.55□□□□□ -0.88
CBX3-206ENST00000481057 ARSHQ5FYA8 562 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms