RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
NDC1-202ENST00000480952 RHPN1Q8TCX5 695 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
NDC1-202ENST00000480952 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 UMODL1Q5DID0 1318 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 F5H6K3 240 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 IFIT2P09913 472 aaKnown RBP16.05■□□□□ 0.16
NDC1-202ENST00000480952 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
NDC1-202ENST00000480952 ADD2P35612 726 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 KLRC3Q07444 240 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 RPUSD2Q8IZ73 545 aaKnown RBP16.05■□□□□ 0.16
NDC1-202ENST00000480952 KIFC2Q96AC6 838 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.16
NDC1-202ENST00000480952 RAVER2Q9HCJ3 691 aaKnown RBP16.05■□□□□ 0.16
NDC1-202ENST00000480952 FBXO40Q9UH90 709 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 SLC4A4Q9Y6R1 1079 aa16.05■□□□□ 0.16
NDC1-202ENST00000480952 MYO9BQ13459 2157 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 ZBBXA8MT70 800 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 CTAGE5O15320 804 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 CABYRO75952 493 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 MYOGP15173 224 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 KCNQ1P51787 676 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 TNFAIP2Q03169 654 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 ITGA7Q13683 1181 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 CCDC144CPQ8IYA2 1237 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.04■□□□□ 0.16
NDC1-202ENST00000480952 PAG1Q9NWQ8 432 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 PCDHA11Q9Y5I1 949 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 XIRP2A4UGR9 3374 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 NCOR1O75376 2440 aa16.04■□□□□ 0.16
NDC1-202ENST00000480952 COL11A1P12107 1806 aaPredicted RBP16.03■□□□□ 0.16
NDC1-202ENST00000480952 NDUFB10O96000 172 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 NKX3-2P78367 333 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 SLC43A3Q8NBI5 491 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 FGD4Q96M96 766 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 AP5M1Q9H0R1 490 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 TRPV6Q9H1D0 765 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 NYAP2Q9P242 653 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 HCN4Q9Y3Q4 1203 aa16.03■□□□□ 0.16
NDC1-202ENST00000480952 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.02■□□□□ 0.16
NDC1-202ENST00000480952 ERC2O15083 957 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 GTPBP6O43824 516 aaPredicted RBP16.02■□□□□ 0.16
NDC1-202ENST00000480952 ZEB2O60315 1214 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 RLBP1P12271 317 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 ATP2A2P16615 1042 aaKnown RBP16.02■□□□□ 0.16
NDC1-202ENST00000480952 FSCN1Q16658 493 aaKnown RBP16.02■□□□□ 0.16
NDC1-202ENST00000480952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.02■□□□□ 0.16
NDC1-202ENST00000480952 STK11IPQ8N1F8 1099 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 NOC4LQ9BVI4 516 aaKnown RBP16.02■□□□□ 0.16
NDC1-202ENST00000480952 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 MKNK2Q9HBH9 465 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 CHD7Q9P2D1 2997 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
NDC1-202ENST00000480952 PARP14Q460N5 1801 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
NDC1-202ENST00000480952 B4GALT4O60513 344 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 UBE3CQ15386 1083 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 TLK2Q86UE8 772 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 LRFN3Q9BTN0 628 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 KATNBL1Q9H079 304 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 EPHX3Q9H6B9 360 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 ARPP21Q9UBL0 812 aaPredicted RBP16.01■□□□□ 0.15
NDC1-202ENST00000480952 FEM1BQ9UK73 627 aa16.01■□□□□ 0.15
NDC1-202ENST00000480952 ARIH1Q9Y4X5 557 aaPredicted RBP16.01■□□□□ 0.15
NDC1-202ENST00000480952 GRIN2DO15399 1336 aa16■□□□□ 0.15
NDC1-202ENST00000480952 RFXAPO00287 272 aa16■□□□□ 0.15
NDC1-202ENST00000480952 CHGBP05060 677 aa16■□□□□ 0.15
NDC1-202ENST00000480952 OAZ1P54368 228 aa16■□□□□ 0.15
NDC1-202ENST00000480952 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
NDC1-202ENST00000480952 SCLYQ96I15 445 aa16■□□□□ 0.15
NDC1-202ENST00000480952 CERS4Q9HA82 394 aa16■□□□□ 0.15
NDC1-202ENST00000480952 GNEQ9Y223 722 aaKnown RBP16■□□□□ 0.15
NDC1-202ENST00000480952 MTCH2Q9Y6C9 303 aa16■□□□□ 0.15
NDC1-202ENST00000480952 ASTN1O14525 1302 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 ASB14A6NK59 587 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 RASA1P20936 1047 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 PSMC6P62333 389 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 TMEM31Q5JXX7 168 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 FAM133AQ8N9E0 248 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 ACAD9Q9H845 621 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 COG5Q9UP83 839 aa15.99■□□□□ 0.15
NDC1-202ENST00000480952 MINDY4BA8MYZ0 360 aa15.98■□□□□ 0.15
NDC1-202ENST00000480952 CA3P07451 260 aa15.98■□□□□ 0.15
NDC1-202ENST00000480952 SMPD1P17405 629 aa15.98■□□□□ 0.15
NDC1-202ENST00000480952 ATP5JP18859 108 aa15.98■□□□□ 0.15
NDC1-202ENST00000480952 POU3F3P20264 500 aaPredicted RBP15.98■□□□□ 0.15
NDC1-202ENST00000480952 TTLL4Q14679 1199 aa15.98■□□□□ 0.15
NDC1-202ENST00000480952 ZSCAN25Q6NSZ9 544 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms