RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MAMDC4Q6UXC1 1216 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 RASGRP2Q7LDG7 609 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 ZNF467Q7Z7K2 595 aaPredicted RBP18.04■□□□□ 0.48
LIMS3-203ENST00000480744 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 AGBL1Q96MI9 1066 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 ACAD9Q9H845 621 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 PDLIM7Q9NR12 457 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 RNF146Q9NTX7 359 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.04■□□□□ 0.48
LIMS3-203ENST00000480744 ANAPC4Q9UJX5 808 aa18.04■□□□□ 0.48
LIMS3-203ENST00000480744 SYNRGQ9UMZ2 1314 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 ADAMTS4O75173 837 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 ALAS1P13196 640 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 ACVR2BQ13705 512 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 RCSD1Q6JBY9 416 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIMS3-203ENST00000480744 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 BADQ92934 168 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 FGD4Q96M96 766 aa18.03■□□□□ 0.48
LIMS3-203ENST00000480744 POTEB2H3BUK9 544 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 ORC4O43929 436 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 PQBP1O60828 265 aaKnown RBP18.02■□□□□ 0.48
LIMS3-203ENST00000480744 FGAP02671 866 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 CNTN2Q02246 1040 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 ALX1Q15699 326 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 C1orf53Q5VUE5 145 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 ARMCX2Q7L311 632 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 ABHD16BQ9H3Z7 469 aa18.02■□□□□ 0.48
LIMS3-203ENST00000480744 RWDD1Q9H446 243 aaPredicted RBP18.02■□□□□ 0.48
LIMS3-203ENST00000480744 ZNF536O15090 1300 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 TRIM43BA6NCK2 446 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 CLTBP09497 229 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
LIMS3-203ENST00000480744 ACLYP53396 1101 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 HAND2P61296 217 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 CCDC144BQ3MJ40 725 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 ZNF589Q86UQ0 364 aaPredicted RBP18.01■□□□□ 0.47
LIMS3-203ENST00000480744 CCDC144CPQ8IYA2 1237 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 TRIM43Q96BQ3 446 aaPredicted RBP18.01■□□□□ 0.47
LIMS3-203ENST00000480744 TRERF1Q96PN7 1200 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 TSEN34Q9BSV6 310 aaKnown RBP18.01■□□□□ 0.47
LIMS3-203ENST00000480744 A1CFQ9NQ94 594 aaKnown RBP18.01■□□□□ 0.47
LIMS3-203ENST00000480744 STARD7Q9NQZ5 370 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 PRR12Q9ULL5 1215 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 LRRC37A2A6NM11 1700 aa18.01■□□□□ 0.47
LIMS3-203ENST00000480744 CCDC171Q6TFL3 1326 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 LCTP09848 1927 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 MYADML2A6NDP7 307 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 PLA2G6O60733 806 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 DUSP11O75319 330 aaKnown RBP18■□□□□ 0.47
LIMS3-203ENST00000480744 C6orf222P0C671 652 aaPredicted RBP18■□□□□ 0.47
LIMS3-203ENST00000480744 AAMPQ13685 434 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 KCNA10Q16322 511 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 TKFCQ3LXA3 575 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 NUP133Q8WUM0 1156 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 DCAF4Q8WV16 495 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 SPC25Q9HBM1 224 aa18■□□□□ 0.47
LIMS3-203ENST00000480744 ADCY6O43306 1168 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
LIMS3-203ENST00000480744 SHHQ15465 462 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
LIMS3-203ENST00000480744 SMC5Q8IY18 1101 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 FAM133AQ8N9E0 248 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 SLC17A8Q8NDX2 589 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 KLHDC9Q8NEP7 349 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 CCPG1Q9ULG6 757 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 LAMA4Q16363 1823 aa17.99■□□□□ 0.47
LIMS3-203ENST00000480744 FRMPD2Q68DX3 1309 aaPredicted RBP17.98■□□□□ 0.47
LIMS3-203ENST00000480744 SOWAHBA6NEL2 793 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 MOXD2PA6NHM9 499 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 FGRP09769 529 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 TOP1P11387 765 aaKnown RBP17.98■□□□□ 0.47
LIMS3-203ENST00000480744 RAG1P15918 1043 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 SLC16A2P36021 539 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 MUM1L1Q5H9M0 696 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 TTBK2Q6IQ55 1244 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 NSMFQ6X4W1 530 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 CHD1LQ86WJ1 897 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 TICAM2Q86XR7 235 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 VTI1AQ96AJ9 217 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 TMEM47Q9BQJ4 181 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 GPCPD1Q9NPB8 672 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 MTMR10Q9NXD2 777 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
LIMS3-203ENST00000480744 ASB14A6NK59 587 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 DCDC2CA8MYV0 355 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 IGHDP01880 384 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 SDSP20132 328 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 NOVP48745 357 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 MFAP1P55081 439 aaKnown RBP17.97■□□□□ 0.47
LIMS3-203ENST00000480744 GNASQ5JWF2 1037 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 PCSK9Q8NBP7 692 aaKnown RBP17.97■□□□□ 0.47
LIMS3-203ENST00000480744 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 FAM161BQ96MY7 647 aa17.97■□□□□ 0.47
LIMS3-203ENST00000480744 DDX49Q9Y6V7 483 aaKnown RBP17.97■□□□□ 0.47
LIMS3-203ENST00000480744 KIAA0355O15063 1070 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms