RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
TRA2B-212ENST00000480461 LBX2Q6XYB7 198 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 CATIPQ7Z7H3 387 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 CCDC144CPQ8IYA2 1237 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 PRPF38AQ8NAV1 312 aaKnown RBP14.28□□□□□ -0.12
TRA2B-212ENST00000480461 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 FEM1BQ9UK73 627 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 PRR12Q9ULL5 1215 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 SLC12A7Q9Y666 1083 aa14.28□□□□□ -0.12
TRA2B-212ENST00000480461 ALPK3Q96L96 1907 aa14.27□□□□□ -0.12
TRA2B-212ENST00000480461 KLRF2D3W0D1 207 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 CYTH3O43739 400 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 EVI5O60447 810 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
TRA2B-212ENST00000480461 CDC27P30260 824 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 TMEM132BQ14DG7 1078 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 CMTR1Q8N1G2 835 aaKnown RBP14.27□□□□□ -0.13
TRA2B-212ENST00000480461 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 KIFC2Q96AC6 838 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
TRA2B-212ENST00000480461 MAP3K14Q99558 947 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 SLF1Q9BQI6 1058 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 UNC93B1Q9H1C4 597 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
TRA2B-212ENST00000480461 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
TRA2B-212ENST00000480461 TPCN1Q9ULQ1 816 aa14.27□□□□□ -0.13
TRA2B-212ENST00000480461 ZNF536O15090 1300 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 DDAH1O94760 285 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 PLEKHA8P1O95397 391 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
TRA2B-212ENST00000480461 SGPL1O95470 568 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 ADD1P35611 737 aaKnown RBP14.26□□□□□ -0.13
TRA2B-212ENST00000480461 STAT2P52630 851 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 FGD1P98174 961 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 FUT2Q10981 343 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 ADGRF4Q8IZF3 695 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 SRBD1Q8N5C6 995 aaKnown RBP14.26□□□□□ -0.13
TRA2B-212ENST00000480461 SMCR8Q8TEV9 937 aaPredicted RBP14.26□□□□□ -0.13
TRA2B-212ENST00000480461 CHURC1Q8WUH1 139 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 JMJD4Q9H9V9 463 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 MGAMO43451 1857 aa14.26□□□□□ -0.13
TRA2B-212ENST00000480461 ZBTB43O43298 467 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 DTNBO60941 627 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 LARGE1O95461 756 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 TAL1P17542 331 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 ASPRV1Q53RT3 343 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 GPATCH4Q5T3I0 446 aaKnown RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 SYDE2Q5VT97 1194 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 GPR153Q6NV75 609 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 FAM160B2Q86V87 743 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 MICU3Q86XE3 530 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 PAGR1Q9BTK6 254 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 RIOX1Q9H6W3 641 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 SLC38A10Q9HBR0 1119 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 NCOA5Q9HCD5 579 aaKnown RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 VAT1LQ9HCJ6 419 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 ZNF214Q9UL59 606 aaPredicted RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 ISY1Q9ULR0 285 aaKnown RBP14.25□□□□□ -0.13
TRA2B-212ENST00000480461 GABRQQ9UN88 632 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 RIPK3Q9Y572 518 aa14.25□□□□□ -0.13
TRA2B-212ENST00000480461 FCGRTP55899 365 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 CCT2P78371 535 aaKnown RBP14.24□□□□□ -0.13
TRA2B-212ENST00000480461 ME3Q16798 604 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 CCDC82Q8N4S0 544 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 GPRC5AQ8NFJ5 357 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 MTMR8Q96EF0 704 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 AGBL1Q96MI9 1066 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 PORCNQ9H237 461 aa14.24□□□□□ -0.13
TRA2B-212ENST00000480461 RAVER2Q9HCJ3 691 aaKnown RBP14.24□□□□□ -0.13
TRA2B-212ENST00000480461 PPP1R11O60927 126 aaPredicted RBP14.23□□□□□ -0.13
TRA2B-212ENST00000480461 CALM1P0DP23 149 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 CALM2P0DP24 149 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 CALM3P0DP25 149 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 ERVK-9P63128 1117 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 ERVK-24P63145 666 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 IKQ13123 557 aaPredicted RBP14.23□□□□□ -0.13
TRA2B-212ENST00000480461 STK3Q13188 491 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 RABEP1Q15276 862 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 NTRK3Q16288 839 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 FAM110CQ1W6H9 321 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 TMTC3Q6ZXV5 915 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 NOL8Q76FK4 1167 aaKnown RBP14.23□□□□□ -0.13
TRA2B-212ENST00000480461 Q7L0L9 218 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 DEFB123Q8N688 67 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 GDF15Q99988 308 aa14.23□□□□□ -0.13
TRA2B-212ENST00000480461 MOV10L1Q9BXT6 1211 aaKnown RBP14.23□□□□□ -0.13
TRA2B-212ENST00000480461 RANBP17Q9H2T7 1088 aaKnown RBP14.23□□□□□ -0.13
TRA2B-212ENST00000480461 NAP1L2Q9ULW6 460 aaPredicted RBP14.23□□□□□ -0.13
TRA2B-212ENST00000480461 hCG_1642624A0A1W2PR95 340 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 ATP2A1O14983 1001 aa14.22□□□□□ -0.13
TRA2B-212ENST00000480461 ADCY3O60266 1144 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms