RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 MYO3BQ8WXR4 1341 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 CCNT1O60563 726 aaKnown RBP14.73□□□□□ -0.05
SEC13-216ENST00000479868 HLA-DOAP06340 250 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 STAT6P42226 847 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 SOGA3Q5TF21 947 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 SPATA1Q5VX52 437 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 COA7Q96BR5 231 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 DNAJC18Q9H819 358 aa14.73□□□□□ -0.05
SEC13-216ENST00000479868 LAD1O00515 517 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 ECE2O60344 883 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 PRPHP41219 470 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 TCP10Q12799 353 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 DHX8Q14562 1220 aaKnown RBP14.72□□□□□ -0.05
SEC13-216ENST00000479868 DACT2Q5SW24 774 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 JAKMIP3Q5VZ66 844 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 STYK1Q6J9G0 422 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 TMEM260Q9NX78 707 aa14.72□□□□□ -0.05
SEC13-216ENST00000479868 MPHOSPH10O00566 681 aaKnown RBP14.71□□□□□ -0.05
SEC13-216ENST00000479868 COBLO75128 1261 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 ZNF543Q08ER8 600 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 PTPN14Q15678 1187 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 STRIP1Q5VSL9 837 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 NEK8Q86SG6 692 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 REXO1Q8N1G1 1221 aaKnown RBP14.71□□□□□ -0.05
SEC13-216ENST00000479868 TBCKQ8TEA7 893 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 LRRC15Q8TF66 581 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 ESYT2A0FGR8 921 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 FAM196BA6NMK8 535 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 RXRBP28702 533 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 TBX2Q13207 712 aaPredicted RBP14.71□□□□□ -0.05
SEC13-216ENST00000479868 CEP135Q66GS9 1140 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 TTBK2Q6IQ55 1244 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 APTXQ7Z2E3 356 aaKnown RBP14.71□□□□□ -0.05
SEC13-216ENST00000479868 PLIN2Q99541 437 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 TMX1Q9H3N1 280 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
SEC13-216ENST00000479868 hCG_1984214I3L0E3 225 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 RPN1P04843 607 aaKnown RBP14.7□□□□□ -0.06
SEC13-216ENST00000479868 OR52Z1P0C646 297 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 UBA7P41226 1012 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 RBM5P52756 815 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEC13-216ENST00000479868 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 NR1I3Q14994 352 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 SHROOM1Q2M3G4 852 aaPredicted RBP14.7□□□□□ -0.06
SEC13-216ENST00000479868 CDKAL1Q5VV42 579 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 RRAGBQ5VZM2 374 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 ADGRF4Q8IZF3 695 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 ZNF713Q8N859 430 aaPredicted RBP14.7□□□□□ -0.06
SEC13-216ENST00000479868 RASSF8Q8NHQ8 419 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 ZNF592Q92610 1267 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 CCSER1Q9C0I3 900 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 EHD4Q9H223 541 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 JMJD4Q9H9V9 463 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 C10orf71Q711Q0 1435 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 A0A1B0GTH6 734 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 DDTLA6NHG4 134 aaPredicted RBP14.7□□□□□ -0.06
SEC13-216ENST00000479868 KCNJ6P48051 423 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 SPECC1LQ69YQ0 1117 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 PPP1R13BQ96KQ4 1090 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
SEC13-216ENST00000479868 NRDCO43847 1150 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 PPP1R11O60927 126 aaPredicted RBP14.69□□□□□ -0.06
SEC13-216ENST00000479868 SLC16A2P36021 539 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 AOC3Q16853 763 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 ZNF658Q5TYW1 1059 aaPredicted RBP14.69□□□□□ -0.06
SEC13-216ENST00000479868 MRIQ9BWK5 157 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 GDAQ9Y2T3 454 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 RGPD3A6NKT7 1758 aaPredicted RBP14.69□□□□□ -0.06
SEC13-216ENST00000479868 RGPD4Q7Z3J3 1758 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 TEX33O43247 280 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 ADCY7P51828 1080 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 FKBP1AP62942 108 aaKnown RBP14.69□□□□□ -0.06
SEC13-216ENST00000479868 KCTD1Q719H9 257 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 SH3BP5LQ7L8J4 393 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 TMEM139Q8IV31 216 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 CCDC112Q8NEF3 446 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 C7orf43Q8WVR3 580 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 PAXBP1Q9Y5B6 917 aa14.69□□□□□ -0.06
SEC13-216ENST00000479868 PSDA5PKW4 1024 aaPredicted RBP14.68□□□□□ -0.06
SEC13-216ENST00000479868 EDIL3O43854 480 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 IDI2Q9BXS1 227 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 KBTBD4Q9NVX7 518 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 RMND1Q9NWS8 449 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 MAPK8IP1Q9UQF2 711 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 PNMA6FA0A0J9YX94 578 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 PLCG1P19174 1290 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 TECP42680 631 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 ADKP55263 362 aaKnown RBP14.68□□□□□ -0.06
SEC13-216ENST00000479868 EZH2Q15910 746 aaKnown RBP14.68□□□□□ -0.06
SEC13-216ENST00000479868 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 CCDC96Q2M329 555 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 CABP7Q86V35 215 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 TC2NQ8N9U0 490 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 CNKSR1Q969H4 720 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 CCDC17Q96LX7 622 aa14.68□□□□□ -0.06
SEC13-216ENST00000479868 DHX36Q9H2U1 1008 aaKnown RBP14.68□□□□□ -0.06
SEC13-216ENST00000479868 ADD3Q9UEY8 706 aaKnown RBP14.68□□□□□ -0.06
SEC13-216ENST00000479868 RWDD2AQ9UIY3 292 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms