RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, human

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2-208	ENST00000479815	SHISA4	Q96DD7	197 aa		10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	RRP36	Q96EU6	259 aa	Known RBP	10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	AIFM3	Q96NN9	605 aa		10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	FEZ1	Q99689	392 aa		10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	JMJD4	Q9H9V9	463 aa		10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	BARHL2	Q9NY43	387 aa		10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	PARP14	Q460N5	1801 aa		10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.02	□□□□□ -0.81
HMGN2-208	ENST00000479815	RLF	Q13129	1914 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	PNMA6F	A0A0J9YX94	578 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	UBE2Q2L	H0YL09	131 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815		H3BQV1	296 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	TRAF5	O00463	557 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	CXCL11	O14625	94 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	ZBTB5	O15062	677 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	MMP1	P03956	469 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	XBP1	P17861	261 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	VCAM1	P19320	739 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	U2AF2	P26368	475 aa	Known RBP eCLIP	10.01	□□□□□ -0.81	1e-38	■■■□□ 16.2
HMGN2-208	ENST00000479815	STAT2	P52630	851 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	KIF23	Q02241	960 aa	Predicted RBP	10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	REST	Q13127	1097 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	PPIL2	Q13356	520 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	MTMR2	Q13614	643 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	IFFO2	Q5TF58	517 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	SYDE2	Q5VT97	1194 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	KRT40	Q6A162	431 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	TTBK2	Q6IQ55	1244 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	GALNT17	Q6IS24	598 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	KCTD1	Q719H9	257 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	CCDC84	Q86UT8	332 aa	Predicted RBP	10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	ADGRF4	Q8IZF3	695 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	DAGLB	Q8NCG7	672 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	CCDC148	Q8NFR7	591 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	PTCD2	Q8WV60	388 aa	Known RBP	10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	PHF20	Q9BVI0	1012 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	EMILIN3	Q9NT22	766 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	FEM1B	Q9UK73	627 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	FZD1	Q9UP38	647 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	ATP6V1D	Q9Y5K8	247 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	ZHX2	Q9Y6X8	837 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	MYPN	Q86TC9	1320 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815	PASK	Q96RG2	1323 aa		10.01	□□□□□ -0.81
HMGN2-208	ENST00000479815		A0A0G2JLL6	359 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	VPS37C	A5D8V6	355 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	TMEM232	C9JQI7	657 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	STXBP3	O00186	592 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	DTNB	O60941	627 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	PPFIA3	O75145	1194 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	FDX1	P10109	184 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	CALML3	P27482	149 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	SPP2	Q13103	211 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	TRIM29	Q14134	588 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	FAM83B	Q5T0W9	1011 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	DMRTA1	Q5VZB9	504 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	WWC2	Q6AWC2	1192 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	BRAP	Q7Z569	592 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	CCDC82	Q8N4S0	544 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	CCDC12	Q8WUD4	166 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	CHURC1	Q8WUH1	139 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	PIGS	Q96S52	555 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	NUP88	Q99567	741 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	UBA5	Q9GZZ9	404 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	RANBP17	Q9H2T7	1088 aa	Known RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	FOXP1	Q9H334	677 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	GBA2	Q9HCG7	927 aa	Predicted RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	GPCPD1	Q9NPB8	672 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	SEC63	Q9UGP8	760 aa	Known RBP	10	□□□□□ -0.81
HMGN2-208	ENST00000479815	MTMR7	Q9Y216	660 aa		10	□□□□□ -0.81
HMGN2-208	ENST00000479815	PPP1R11	O60927	126 aa	Predicted RBP	9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	PSEN2	P49810	448 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	TRAF1	Q13077	416 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	CDC37	Q16543	378 aa	Predicted RBP	9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	QRICH1	Q2TAL8	776 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	ATL3	Q6DD88	541 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	TYW1B	Q6NUM6	668 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	MOB2	Q70IA6	237 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	PLPP6	Q8IY26	295 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	SPICE1	Q8N0Z3	855 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	TNFRSF25	Q93038	417 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	CLMN	Q96JQ2	1002 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	ZMYND12	Q9H0C1	365 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	CPVL	Q9H3G5	476 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	PLA2G2E	Q9NZK7	142 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	PNMA2	Q9UL42	364 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	PPP1R9A	Q9ULJ8	1098 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	PRR12	Q9ULL5	1215 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	ADAMTS5	Q9UNA0	930 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	MYH15	Q9Y2K3	1946 aa		9.99	□□□□□ -0.81
HMGN2-208	ENST00000479815	hCG_1642624	A0A1W2PR95	340 aa		9.98	□□□□□ -0.81
HMGN2-208	ENST00000479815	TRIM75P	A6NK02	468 aa		9.98	□□□□□ -0.81
HMGN2-208	ENST00000479815		M0R2N6	131 aa		9.98	□□□□□ -0.81
HMGN2-208	ENST00000479815	IRF6	O14896	467 aa		9.98	□□□□□ -0.81
HMGN2-208	ENST00000479815	CELF2	O95319	508 aa	Known RBP	9.98	□□□□□ -0.81
HMGN2-208	ENST00000479815	BAG4	O95429	457 aa	Known RBP	9.98	□□□□□ -0.81
HMGN2-208	ENST00000479815	HOXA7	P31268	230 aa	Predicted RBP	9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms