RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, human

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VSIG1-204	ENST00000479635	HTRA3	P83110	453 aa		5.01	□□□□□ -1.61
VSIG1-204	ENST00000479635	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.01	□□□□□ -1.61
VSIG1-204	ENST00000479635	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.01	□□□□□ -1.61
VSIG1-204	ENST00000479635	TTC9B	Q8N6N2	239 aa		5.01	□□□□□ -1.61
VSIG1-204	ENST00000479635	JMJD8	Q96S16	334 aa		5.01	□□□□□ -1.61
VSIG1-204	ENST00000479635	SUPT5H	O00267	1087 aa	Known RBP	5	□□□□□ -1.61
VSIG1-204	ENST00000479635	ACVRL1	P37023	503 aa		5	□□□□□ -1.61
VSIG1-204	ENST00000479635	DLX2	Q07687	328 aa	Predicted RBP	5	□□□□□ -1.61
VSIG1-204	ENST00000479635	NBPF9	Q3BBW0	867 aa		5	□□□□□ -1.61
VSIG1-204	ENST00000479635		A0A1W2PQJ5	194 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	SIGLEC6	O43699	453 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	DNAJA2	O60884	412 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	HTR3B	O95264	441 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	ENDOU	P21128	410 aa	Known RBP	4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	MC3R	P41968	323 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	MVK	Q03426	396 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	PAQR3	Q6TCH7	311 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	USP51	Q70EK9	711 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	DVL3	Q92997	716 aa	Predicted RBP	4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	FRMD6	Q96NE9	622 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	AP5S1	Q9NUS5	200 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	ST6GALNAC2	Q9UJ37	374 aa		4.99	□□□□□ -1.61
VSIG1-204	ENST00000479635	RGS13	O14921	159 aa		4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	UBOX5	O94941	541 aa		4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	PLAT	P00750	562 aa		4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	LDHB	P07195	334 aa	Known RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	DBH	P09172	617 aa		4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	RLBP1	P12271	317 aa		4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	SARS	P49591	514 aa	Known RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	CEBPA	P49715	358 aa	Predicted RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	KISS1R	Q969F8	398 aa	Predicted RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	CHST7	Q9NS84	486 aa		4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	DBR1	Q9UK59	544 aa	Known RBP	4.98	□□□□□ -1.61
VSIG1-204	ENST00000479635	PRR36	Q9H6K5	1346 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635		F8W031	263 aa	Predicted RBP	4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	FZD7	O75084	574 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	CYBB	P04839	570 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	NCAM1	P13591	858 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	RAG1	P15918	1043 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	GNA15	P30679	374 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	PRR5	P85299	388 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	BICRAL	Q6AI39	1079 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	CRIP3	Q6Q6R5	217 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	CCDC84	Q86UT8	332 aa	Predicted RBP	4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	ZNF761	Q86XN6	746 aa	Predicted RBP	4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	NAT16	Q8N8M0	369 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	PHC3	Q8NDX5	983 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	TMEM52	Q8NDY8	209 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	ARID3A	Q99856	593 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	RNF38	Q9H0F5	515 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	NTM	Q9P121	344 aa		4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.97	□□□□□ -1.61
VSIG1-204	ENST00000479635	FAM221A	A4D161	298 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635		F6X3S4	739 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	ZNF205	O95201	554 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	F13A1	P00488	732 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	ASGR2	P07307	311 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	ARSH	Q5FYA8	562 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	MEI1	Q5TIA1	1274 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	JAML	Q86YT9	394 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	AEBP1	Q8IUX7	1158 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	GATAD2B	Q8WXI9	593 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	VPS11	Q9H270	941 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	TIMELESS	Q9UNS1	1208 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	ZNF536	O15090	1300 aa		4.96	□□□□□ -1.62
VSIG1-204	ENST00000479635	P4HB	P07237	508 aa	Known RBP	4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	BMP8B	P34820	402 aa		4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	B3GNT8	Q7Z7M8	397 aa		4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	ALG3	Q92685	438 aa		4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	ASB16	Q96NS5	453 aa		4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	ANTXR1	Q9H6X2	564 aa		4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	AK5	Q9Y6K8	562 aa		4.95	□□□□□ -1.62
VSIG1-204	ENST00000479635	SRGAP3	O43295	1099 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	VAV1	P15498	845 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	CTSK	P43235	329 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	CAMK2G	Q13555	558 aa	Predicted RBP	4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	MLEC	Q14165	292 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	HLA-DQA1	Q5Y7H0	255 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	CRTC3	Q6UUV7	619 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	GLB1L	Q6UWU2	654 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	TTLL7	Q6ZT98	887 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	ERICH6	Q7L0X2	663 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	NOX5	Q96PH1	765 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	ZNF747	Q9BV97	191 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	PCED1A	Q9H1Q7	454 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	GFOD1	Q9NXC2	390 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	HS3ST3A1	Q9Y663	406 aa		4.94	□□□□□ -1.62
VSIG1-204	ENST00000479635	PF4	P02776	101 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	AMH	P03971	560 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	TGM1	P22735	817 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	TACR1	P25103	407 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	POLR2B	P30876	1174 aa	Known RBP	4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	LMNB2	Q03252	620 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	LIMS2	Q7Z4I7	341 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	ADAMTS17	Q8TE56	1095 aa		4.93	□□□□□ -1.62
VSIG1-204	ENST00000479635	ZBTB8A	Q96BR9	441 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms