RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MAPK1P28482 360 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 PHKA1P46020 1223 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 MMP14P50281 582 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 PRELPP51888 382 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 FKBP1AP62942 108 aaKnown RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 NUCB1Q02818 461 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 TTF1Q15361 905 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 TEAD4Q15561 434 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 COX20Q5RI15 118 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 SPTY2D1Q68D10 685 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 TMEM214Q6NUQ4 689 aaKnown RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 ZNF512BQ96KM6 892 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 DBNLQ9UJU6 430 aaKnown RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 HDAC9Q9UKV0 1011 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 COL4A5P29400 1685 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 MAST3O60307 1309 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 PDS5AQ29RF7 1337 aaKnown RBP7.47□□□□□ -1.21
SF3B1-209ENST00000479532 TTC41PQ6P2S7 1318 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 FAM205AQ6ZU69 1335 aa7.47□□□□□ -1.21
SF3B1-209ENST00000479532 IQCA1LA6NCM1 817 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 YDJCA8MPS7 323 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 H7C1D1 291 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 PSMD14O00487 310 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 BNIP3LO60238 219 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 IGSF3O75054 1194 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 FAM13AO94988 1023 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 VIL1P09327 827 aaKnown RBP7.46□□□□□ -1.22
SF3B1-209ENST00000479532 MX1P20591 662 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 YY1P25490 414 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 ADH6P28332 368 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 NOS2P35228 1153 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 CXCL9Q07325 125 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
SF3B1-209ENST00000479532 LRRFIP1Q32MZ4 808 aaKnown RBP7.46□□□□□ -1.22
SF3B1-209ENST00000479532 MFSD14BQ5SR56 506 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 ZNF295-AS1Q8N0V1 137 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 FAM43AQ8N2R8 423 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 SPATA5Q8NB90 893 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 AGBL3Q8NEM8 1001 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 ECHDC1Q9NTX5 307 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 TLR7Q9NYK1 1049 aaKnown RBP7.46□□□□□ -1.22
SF3B1-209ENST00000479532 DCTN4Q9UJW0 460 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 SUGT1Q9Y2Z0 365 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.46□□□□□ -1.22
SF3B1-209ENST00000479532 ZNF541Q9H0D2 1346 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 SCN9AQ15858 1988 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 SRCAPQ6ZRS2 3230 aa7.46□□□□□ -1.22
SF3B1-209ENST00000479532 SCN4AP35499 1836 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 WDR90Q96KV7 1748 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 ANKRD33BA6NCL7 494 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 TNFRSF10BO14763 440 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 GLRX3O76003 335 aaKnown RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 DDNO94850 711 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 LDHBP07195 334 aaKnown RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 NPR3P17342 541 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 ATP5JP18859 108 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 HIRAP54198 1017 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 GSTO1P78417 241 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 DZIP1Q86YF9 867 aaKnown RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 C16orf71Q8IYS4 520 aaPredicted RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 RHBDD1Q8TEB9 315 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 DPF2Q92785 391 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 MYO19Q96H55 970 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 DNAJC2Q99543 621 aaKnown RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 NIFKQ9BYG3 293 aaKnown RBP7.45□□□□□ -1.22
SF3B1-209ENST00000479532 LRP2BPQ9P2M1 347 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 ABCF2Q9UG63 623 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 LRFN2Q9ULH4 789 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 HCN4Q9Y3Q4 1203 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 AOX1Q06278 1338 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 SALL1Q9NSC2 1324 aa7.45□□□□□ -1.22
SF3B1-209ENST00000479532 MAST2Q6P0Q8 1798 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 ZNF646O15015 1829 aaPredicted RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 RRP9O43818 475 aaKnown RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 MCAMP43121 646 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 GMPSP49915 693 aaPredicted RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 MAP3K12Q12852 859 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 GNASQ5JWF2 1037 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 DACT2Q5SW24 774 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 TMED8Q6PL24 325 aaPredicted RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 ALDH16A1Q8IZ83 802 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 ZNF526Q8TF50 670 aaPredicted RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 IPO9Q96P70 1041 aaKnown RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 NACC1Q96RE7 527 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 NOL10Q9BSC4 688 aaKnown RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 BOLA2Q9H3K6 86 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 PAG1Q9NWQ8 432 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 HMG20BQ9P0W2 317 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 STIM2Q9P246 746 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 CNOT7Q9UIV1 285 aaKnown RBP7.44□□□□□ -1.22
SF3B1-209ENST00000479532 HACL1Q9UJ83 578 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 JAG2Q9Y219 1238 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 AKAP11Q9UKA4 1901 aa7.44□□□□□ -1.22
SF3B1-209ENST00000479532 GOLGB1Q14789 3259 aaKnown RBP7.43□□□□□ -1.22
SF3B1-209ENST00000479532 AK9Q5TCS8 1911 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms