RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 CCND3P30281 292 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 GNA15P30679 374 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 FCGRTP55899 365 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 RACK1P63244 317 aaKnown RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 FOXO4P98177 505 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 PPIL2Q13356 520 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ARHGEF6Q15052 776 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 TLR1Q15399 786 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 TEAD4Q15561 434 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 CCL14Q16627 93 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 SHROOM1Q2M3G4 852 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 LRRC24Q50LG9 513 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF394Q53GI3 561 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 C9orf50Q5SZB4 431 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ANO1Q5XXA6 986 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 LMBR1LQ6UX01 489 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 KSR2Q6VAB6 950 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF804AQ7Z570 1209 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 NECAB2Q7Z6G3 386 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 KDF1Q8NAX2 398 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 MAFAQ8NHW3 353 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 FAM84BQ96KN1 310 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 NECAB3Q96P71 396 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 LNPKQ9C0E8 428 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ANKRD2Q9GZV1 360 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 TTYH1Q9H313 450 aaPredicted RBP4.99□□□□□ -1.61
COPS7B-220ENST00000479430 CCSER2Q9H7U1 834 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 CNNM1Q9NRU3 951 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF232Q9UNY5 417 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 ADAMTS8Q9UP79 889 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 PPP2R3BQ9Y5P8 575 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 TTC28Q96AY4 2481 aa4.99□□□□□ -1.61
COPS7B-220ENST00000479430 SIPA1L1O43166 1804 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 TRIM75PA6NK02 468 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 APAF1O14727 1248 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 HOXD10P28358 340 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 DNAJA1P31689 397 aaKnown RBP4.98□□□□□ -1.61
COPS7B-220ENST00000479430 CENPCQ03188 943 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 GCKRQ14397 625 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 SHHQ15465 462 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 C8orf34Q49A92 452 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 ANKRD23Q86SG2 305 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 TDRD7Q8NHU6 1098 aaKnown RBP4.98□□□□□ -1.61
COPS7B-220ENST00000479430 GPR152Q8TDT2 470 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 ESYT1Q9BSJ8 1104 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 C11orf49Q9H6J7 331 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 PAK6Q9NQU5 681 aaPredicted RBP4.98□□□□□ -1.61
COPS7B-220ENST00000479430 PCDHGB7Q9Y5F8 929 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 ZHX2Q9Y6X8 837 aa4.98□□□□□ -1.61
COPS7B-220ENST00000479430 LOC285556D6RIA3 1793 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 EIF1AYO14602 144 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 FRAT2O75474 233 aaPredicted RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 CD2BP2O95400 341 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 ADH1CP00326 375 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 CSF1RP07333 972 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF853P0CG23 659 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 HIBADHP31937 336 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 BMP8BP34820 402 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 USP5P45974 858 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 CBLBQ13191 982 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 NR5A1Q13285 461 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 TNFAIP1Q13829 316 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 RRP1BQ14684 758 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 CCDC85BQ15834 202 aaPredicted RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 CCDC144BQ3MJ40 725 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 LRIT3Q3SXY7 679 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 TAF7LQ5H9L4 462 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 APOBEC3HQ6NTF7 200 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 LDHAL6AQ6ZMR3 332 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF662Q6ZS27 426 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 TREML1Q86YW5 311 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF295-AS1Q8N0V1 137 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 ANKLE1Q8NAG6 615 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 TRIB2Q92519 343 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 RUNDC1Q96C34 613 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 ZNF341Q9BYN7 854 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 PHACTR1Q9C0D0 580 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 SRA1Q9HD15 236 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 DDX41Q9UJV9 622 aaKnown RBP4.97□□□□□ -1.61
COPS7B-220ENST00000479430 FAM205AQ6ZU69 1335 aa4.97□□□□□ -1.61
COPS7B-220ENST00000479430 MCM3APO60318 1980 aa4.96□□□□□ -1.61
COPS7B-220ENST00000479430 COL11A1P12107 1806 aaPredicted RBP4.96□□□□□ -1.62
COPS7B-220ENST00000479430 A0A1W2PPC1 479 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 OPLAHO14841 1288 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 WDHD1O75717 1129 aaPredicted RBP4.96□□□□□ -1.62
COPS7B-220ENST00000479430 RPIAP49247 311 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 PRMT2P55345 433 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 PPATQ06203 517 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 LMOD3Q0VAK6 560 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 NEXNQ0ZGT2 675 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 IFIT5Q13325 482 aaKnown RBP4.96□□□□□ -1.62
COPS7B-220ENST00000479430 PICALMQ13492 652 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 RTN1Q16799 776 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.96□□□□□ -1.62
COPS7B-220ENST00000479430 ZNF697Q5TEC3 545 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 CDC42EP5Q6NZY7 148 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 PI16Q6UXB8 463 aa4.96□□□□□ -1.62
COPS7B-220ENST00000479430 SMCR8Q8TEV9 937 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms