RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 MCMBPQ9BTE3 642 aa8.3□□□□□ -1.08
CCDC58-204ENST00000479414 SNTG2Q9NY99 539 aa8.3□□□□□ -1.08
CCDC58-204ENST00000479414 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
CCDC58-204ENST00000479414 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 AGRPO00253 132 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 AURKAO14965 403 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 VAMP4O75379 141 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 KCNH1O95259 989 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 CAPNS1P04632 268 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 ZPBP2Q6X784 338 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 DPH6Q7L8W6 267 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 FLAD1Q8NFF5 587 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 PPP1R14AQ96A00 147 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 FCRL2Q96LA5 508 aaPredicted RBP8.29□□□□□ -1.08
CCDC58-204ENST00000479414 LGR4Q9BXB1 951 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 LRP2BPQ9P2M1 347 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 EBF1Q9UH73 591 aa8.29□□□□□ -1.08
CCDC58-204ENST00000479414 FAM221BA6H8Z2 402 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 CCDC85CA6NKD9 419 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 GSTM1P09488 218 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 IFNGR1P15260 489 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 GTF2IRD2BQ6EKJ0 949 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 GTF2IRD2Q86UP8 949 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 PDZD8Q8NEN9 1154 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 MAP6Q96JE9 813 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 CDADC1Q9BWV3 514 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 PIF1Q9H611 641 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 ERVK13-1Q9NX77 482 aa8.28□□□□□ -1.08
CCDC58-204ENST00000479414 A0A1W2PQU0 124 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 FGF10O15520 208 aaPredicted RBP8.27□□□□□ -1.09
CCDC58-204ENST00000479414 HPXP02790 462 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 HK2P52789 917 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 DPY19L1Q2PZI1 675 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 CCDC144BQ3MJ40 725 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 ATG4DQ86TL0 474 aaPredicted RBP8.27□□□□□ -1.09
CCDC58-204ENST00000479414 ANKS4BQ8N8V4 417 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 SRPK1Q96SB4 655 aaKnown RBP8.27□□□□□ -1.09
CCDC58-204ENST00000479414 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 TNFRSF10DQ9UBN6 386 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 ZMYM5Q9UJ78 669 aa8.27□□□□□ -1.09
CCDC58-204ENST00000479414 GPR55Q9Y2T6 319 aaPredicted RBP8.27□□□□□ -1.09
CCDC58-204ENST00000479414 STXBP3O00186 592 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 TBX1O43435 398 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 KIR2DL1P43626 348 aaPredicted RBP8.26□□□□□ -1.09
CCDC58-204ENST00000479414 KIR2DL2P43627 348 aaPredicted RBP8.26□□□□□ -1.09
CCDC58-204ENST00000479414 CEBPAP49715 358 aaPredicted RBP8.26□□□□□ -1.09
CCDC58-204ENST00000479414 CHRNEQ04844 493 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 NR0B2Q15466 257 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 NFE2L2Q16236 605 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 MTERF2Q49AM1 385 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 EEF1DP3Q658K8 133 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
CCDC58-204ENST00000479414 BTN2A2Q8WVV5 523 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 HHIPL1Q96JK4 782 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 SP110Q9HB58 689 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 CYP26B1Q9NR63 512 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 BACE2Q9Y5Z0 518 aa8.26□□□□□ -1.09
CCDC58-204ENST00000479414 C2orf71A6NGG8 1288 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 ITGB5P18084 799 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 HOXC12P31275 282 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 IRAK1P51617 712 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 PPP2R2AP63151 447 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 IFRD2Q12894 506 aaPredicted RBP8.25□□□□□ -1.09
CCDC58-204ENST00000479414 CYP2R1Q6VVX0 501 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 SPATC1Q76KD6 591 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 SPPL2CQ8IUH8 684 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 OXR1Q8N573 874 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 TMEM52Q8NDY8 209 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 CCDC140Q96MF4 163 aa8.25□□□□□ -1.09
CCDC58-204ENST00000479414 CDK11AQ9UQ88 783 aaPredicted RBP8.25□□□□□ -1.09
CCDC58-204ENST00000479414 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 FITM1A5D6W6 292 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 FADS2P1A8MWK0 482 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 SCG5P05408 212 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 RAC2P15153 192 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 AFMP43652 599 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 CYP4F3Q08477 520 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 HSP90AA2PQ14568 343 aaPredicted RBP8.24□□□□□ -1.09
CCDC58-204ENST00000479414 BMS1Q14692 1282 aaKnown RBP8.24□□□□□ -1.09
CCDC58-204ENST00000479414 COPS5Q92905 334 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 PTCHD1Q96NR3 888 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 SPATA9Q9BWV2 254 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 ZSWIM4Q9H7M6 989 aa8.24□□□□□ -1.09
CCDC58-204ENST00000479414 SEPHS1P49903 392 aa8.23□□□□□ -1.09
CCDC58-204ENST00000479414 ERVFC1P60507 584 aa8.23□□□□□ -1.09
CCDC58-204ENST00000479414 SSRP1Q08945 709 aaKnown RBP8.23□□□□□ -1.09
CCDC58-204ENST00000479414 XP32Q5T750 250 aa8.23□□□□□ -1.09
CCDC58-204ENST00000479414 NAT16Q8N8M0 369 aa8.23□□□□□ -1.09
CCDC58-204ENST00000479414 ARHGEF4Q9NR80 690 aa8.23□□□□□ -1.09
CCDC58-204ENST00000479414 NOTOA8MTQ0 251 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 BIN1O00499 593 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 ADCY3O60266 1144 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 DIAPH1O60610 1272 aaKnown RBP8.22□□□□□ -1.09
CCDC58-204ENST00000479414 USP2O75604 605 aaPredicted RBP8.22□□□□□ -1.09
CCDC58-204ENST00000479414 SCRN1Q12765 414 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 HLA-DQA1Q5Y7H0 255 aa8.22□□□□□ -1.09
CCDC58-204ENST00000479414 SLCO6A1Q86UG4 719 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms