RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 FBXL16Q8N461 479 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
CDK11A-216ENST00000479362 IGDCC4Q8TDY8 1250 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 SMCR8Q8TEV9 937 aaPredicted RBP12.15□□□□□ -0.46
CDK11A-216ENST00000479362 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDK11A-216ENST00000479362 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
CDK11A-216ENST00000479362 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
CDK11A-216ENST00000479362 IL17RBQ9NRM6 502 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
CDK11A-216ENST00000479362 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
CDK11A-216ENST00000479362 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
CDK11A-216ENST00000479362 GUCY1A2P33402 732 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 LIFRP42702 1097 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 JAG1P78504 1218 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 ICA1Q05084 483 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
CDK11A-216ENST00000479362 LHX8Q68G74 356 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
CDK11A-216ENST00000479362 DGKHQ86XP1 1220 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 MTMR4Q9NYA4 1195 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 STX8Q9UNK0 236 aa12.14□□□□□ -0.47
CDK11A-216ENST00000479362 RLFQ13129 1914 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 CCDC69A6NI79 296 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 TTLL1O95922 423 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 MCM2P49736 904 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 ALYREFQ86V81 257 aaKnown RBP12.13□□□□□ -0.47
CDK11A-216ENST00000479362 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 SNX21Q969T3 373 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 KAT14Q9H8E8 782 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
CDK11A-216ENST00000479362 THEGQ9P2T0 379 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 NAP1L2Q9ULW6 460 aaPredicted RBP12.13□□□□□ -0.47
CDK11A-216ENST00000479362 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 LOC285556D6RIA3 1793 aa12.13□□□□□ -0.47
CDK11A-216ENST00000479362 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
CDK11A-216ENST00000479362 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
CDK11A-216ENST00000479362 APOA5Q6Q788 366 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 ANKS1AQ92625 1134 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
CDK11A-216ENST00000479362 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
CDK11A-216ENST00000479362 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 LIMCH1Q9UPQ0 1083 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 SLC12A7Q9Y666 1083 aa12.12□□□□□ -0.47
CDK11A-216ENST00000479362 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
CDK11A-216ENST00000479362 DDAH1O94760 285 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 PTPRAP18433 802 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 NOVP48745 357 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 BECN1Q14457 450 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 CATIPQ7Z7H3 387 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 CCDC84Q86UT8 332 aaPredicted RBP12.11□□□□□ -0.47
CDK11A-216ENST00000479362 MICU3Q86XE3 530 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 ZNF654Q8IZM8 581 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 LRRC47Q8N1G4 583 aaKnown RBP12.11□□□□□ -0.47
CDK11A-216ENST00000479362 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
CDK11A-216ENST00000479362 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
CDK11A-216ENST00000479362 CLIP2Q9UDT6 1046 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 BRPF3Q9ULD4 1205 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 AFG3L2Q9Y4W6 797 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
CDK11A-216ENST00000479362 TRANK1O15050 2925 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 MYH6P13533 1939 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 NID2Q14112 1375 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 ZBTB43O43298 467 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 LARGE1O95461 756 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 EVCP57679 992 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
CDK11A-216ENST00000479362 CACNB2Q08289 660 aaPredicted RBP12.1□□□□□ -0.47
CDK11A-216ENST00000479362 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 RAB11FIP4Q86YS3 637 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 ZNF274Q96GC6 653 aaPredicted RBP12.1□□□□□ -0.47
CDK11A-216ENST00000479362 FEZ1Q99689 392 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 MYL10Q9BUA6 226 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms