RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 SLC38A10Q9HBR0 1119 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 CEP350Q5VT06 3117 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 MYPNQ86TC9 1320 aa15.16■□□□□ 0.02
CHD3-210ENST00000479080 PNMA6FA0A0J9YX94 578 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 VWA5AO00534 786 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 IKQ13123 557 aaPredicted RBP15.15■□□□□ 0.02
CHD3-210ENST00000479080 KRT40Q6A162 431 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 CCDC174Q6PII3 467 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
CHD3-210ENST00000479080 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
CHD3-210ENST00000479080 R3HDMLQ9H3Y0 253 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 CWC22Q9HCG8 908 aaKnown RBP15.15■□□□□ 0.02
CHD3-210ENST00000479080 BARHL2Q9NY43 387 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 BTBD7Q9P203 1132 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 KCNJ14Q9UNX9 436 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
CHD3-210ENST00000479080 THSD7BQ9C0I4 1608 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 KIF28PB7ZC32 967 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 AOC2O75106 756 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 BRD1O95696 1058 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 CYP2C8P10632 490 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 COG2Q14746 738 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 TMEM132BQ14DG7 1078 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 HEATR3Q7Z4Q2 680 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 FBXO18Q8NFZ0 1043 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 PHF20Q9BVI0 1012 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 RAVER2Q9HCJ3 691 aaKnown RBP15.14■□□□□ 0.01
CHD3-210ENST00000479080 TXNRD2Q9NNW7 524 aa15.14■□□□□ 0.01
CHD3-210ENST00000479080 ZNF214Q9UL59 606 aaPredicted RBP15.14■□□□□ 0.01
CHD3-210ENST00000479080 COL11A1P12107 1806 aaPredicted RBP15.13■□□□□ 0.01
CHD3-210ENST00000479080 PDHXO00330 501 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 STX6O43752 255 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 HERVK_113P62684 666 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 KIF23Q02241 960 aaPredicted RBP15.13■□□□□ 0.01
CHD3-210ENST00000479080 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
CHD3-210ENST00000479080 LARP1BQ659C4 914 aaKnown RBP15.13■□□□□ 0.01
CHD3-210ENST00000479080 OXER1Q8TDS5 423 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 TNFRSF25Q93038 417 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 C8orf76Q96K31 380 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 CAPNS2Q96L46 248 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
CHD3-210ENST00000479080 SLC45A1Q9Y2W3 748 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 RIPK3Q9Y572 518 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 MYH6P13533 1939 aa15.13■□□□□ 0.01
CHD3-210ENST00000479080 MANSC4A6NHS7 340 aaPredicted RBP15.12■□□□□ 0.01
CHD3-210ENST00000479080 M0R2N6 131 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 ICAM1P05362 532 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 AKAP17AQ02040 695 aaKnown RBP15.12■□□□□ 0.01
CHD3-210ENST00000479080 RESTQ13127 1097 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 DEFB115Q30KQ5 88 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 USH1GQ495M9 461 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 CLEC4DQ8WXI8 215 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 CCDC102AQ96A19 550 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 RBPJLQ9UBG7 517 aa15.12■□□□□ 0.01
CHD3-210ENST00000479080 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 VPS37CA5D8V6 355 aaPredicted RBP15.11■□□□□ 0.01
CHD3-210ENST00000479080 ATP2A1O14983 1001 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 MMP1P03956 469 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
CHD3-210ENST00000479080 MUM1L1Q5H9M0 696 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 EARS2Q5JPH6 523 aaKnown RBP15.11■□□□□ 0.01
CHD3-210ENST00000479080 WASF1Q92558 559 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 CHAMP1Q96JM3 812 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 SH3GLB2Q9NR46 395 aa15.11■□□□□ 0.01
CHD3-210ENST00000479080 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
CHD3-210ENST00000479080 SEC63Q9UGP8 760 aaKnown RBP15.11■□□□□ 0.01
CHD3-210ENST00000479080 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
CHD3-210ENST00000479080 ESYT2A0FGR8 921 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 hCG_1984214I3L0E3 225 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 OSBPP22059 807 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 TM4SF4P48230 202 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 VEGFBP49765 207 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 NAPAP54920 295 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 GRM1Q13255 1194 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 NR5A1Q13285 461 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 Q3C1V9 767 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 FOXD4L5Q5VV16 416 aaPredicted RBP15.1■□□□□ 0.01
CHD3-210ENST00000479080 PPP1R18Q6NYC8 613 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 IFNL1Q8IU54 200 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 CPXCR1Q8N123 301 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 ZNF713Q8N859 430 aaPredicted RBP15.1■□□□□ 0.01
CHD3-210ENST00000479080 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 RASGRP4Q8TDF6 673 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 FOXD4L4Q8WXT5 416 aaPredicted RBP15.1■□□□□ 0.01
CHD3-210ENST00000479080 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 AMNQ9BXJ7 453 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 ZMYND12Q9H0C1 365 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 HOXC10Q9NYD6 342 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
CHD3-210ENST00000479080 BTBD18B2RXH4 712 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 NFIBO00712 420 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 ZBED4O75132 1171 aa15.09■□□□□ 0.01
CHD3-210ENST00000479080 ZSCAN22P10073 491 aaPredicted RBP15.09■□□□□ 0.01
CHD3-210ENST00000479080 PABPC4Q13310 644 aaKnown RBP eCLIP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms