RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 PRPF38AQ8NAV1 312 aaKnown RBP12.74□□□□□ -0.37
APTX-222ENST00000478279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
APTX-222ENST00000478279 FGD4Q96M96 766 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
APTX-222ENST00000478279 UMODL1Q5DID0 1318 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 ZBED4O75132 1171 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 CABYRO75952 493 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 MBD4O95243 580 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 POU3F3P20264 500 aaPredicted RBP12.73□□□□□ -0.37
APTX-222ENST00000478279 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 KCNQ1P51787 676 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 CCL23P55773 120 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 BEX3Q00994 111 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 ARMCX2Q7L311 632 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
APTX-222ENST00000478279 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 ANKRD35Q8N283 1001 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
APTX-222ENST00000478279 NOC4LQ9BVI4 516 aaKnown RBP12.73□□□□□ -0.37
APTX-222ENST00000478279 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
APTX-222ENST00000478279 KATNBL1Q9H079 304 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 HCN4Q9Y3Q4 1203 aa12.73□□□□□ -0.37
APTX-222ENST00000478279 F5H6K3 240 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 MYOGP15173 224 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 ADD2P35612 726 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 KLRC3Q07444 240 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 SKIV2LQ15477 1246 aaKnown RBP12.72□□□□□ -0.37
APTX-222ENST00000478279 CXCL17Q6UXB2 119 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 CCDC144CPQ8IYA2 1237 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
APTX-222ENST00000478279 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 IL1RAPL2Q9NP60 686 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
APTX-222ENST00000478279 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
APTX-222ENST00000478279 ASTN1O14525 1302 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 GRIN2DO15399 1336 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 ZBBXA8MT70 800 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 GTPBP6O43824 516 aaPredicted RBP12.71□□□□□ -0.37
APTX-222ENST00000478279 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.37
APTX-222ENST00000478279 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 ITGA7Q13683 1181 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 CEP85Q6P2H3 762 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 WNT8AQ9H1J5 351 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 RAVER2Q9HCJ3 691 aaKnown RBP12.71□□□□□ -0.37
APTX-222ENST00000478279 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 COG5Q9UP83 839 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 MTCH2Q9Y6C9 303 aa12.71□□□□□ -0.37
APTX-222ENST00000478279 BRWD1Q9NSI6 2320 aa12.71□□□□□ -0.38
APTX-222ENST00000478279 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 TLL1O43897 1013 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 B4GALT4O60513 344 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 NDUFB10O96000 172 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 HSP90AB4PQ58FF6 505 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 CTR9Q6PD62 1173 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 NOL8Q76FK4 1167 aaKnown RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 CLASRPQ8N2M8 674 aaKnown RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 KIFC2Q96AC6 838 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 VWCEQ96DN2 955 aa12.7□□□□□ -0.38
APTX-222ENST00000478279 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 GREB1LQ9C091 1923 aaPredicted RBP12.7□□□□□ -0.38
APTX-222ENST00000478279 RFXAPO00287 272 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 ZEB2O60315 1214 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 OAZ1P54368 228 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 SCLYQ96I15 445 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 AGBL1Q96MI9 1066 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 AP5M1Q9H0R1 490 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 PAG1Q9NWQ8 432 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 FEM1BQ9UK73 627 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 SLC4A4Q9Y6R1 1079 aa12.69□□□□□ -0.38
APTX-222ENST00000478279 DYNC1LI2O43237 492 aaPredicted RBP12.68□□□□□ -0.38
APTX-222ENST00000478279 GPR37L1O60883 481 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 CA3P07451 260 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 PFKMP08237 780 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
APTX-222ENST00000478279 UBE3CQ15386 1083 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 TLK2Q86UE8 772 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.68□□□□□ -0.38
APTX-222ENST00000478279 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
APTX-222ENST00000478279 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
APTX-222ENST00000478279 ASB14A6NK59 587 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms