RNA–Protein interactions for RNA: ENST00000478197.1

C2orf88-207, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-207ENST00000478197 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
C2orf88-207ENST00000478197 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
C2orf88-207ENST00000478197 MYH4Q9Y623 1939 aa17.38■□□□□ 0.37
C2orf88-207ENST00000478197 F5H6K3 240 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 WDR46O15213 610 aaKnown RBP17.37■□□□□ 0.37
C2orf88-207ENST00000478197 NMT2O60551 498 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 PLA2G6O60733 806 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 GNAQP50148 359 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 KLRC3Q07444 240 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
C2orf88-207ENST00000478197 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
C2orf88-207ENST00000478197 SLC15A5A6NIM6 579 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 FDX1P10109 184 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 PTPREP23469 700 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 CACNB2Q08289 660 aaPredicted RBP17.36■□□□□ 0.37
C2orf88-207ENST00000478197 CCL14Q16627 93 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 DIS3LQ8TF46 1054 aaKnown RBP17.36■□□□□ 0.37
C2orf88-207ENST00000478197 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
C2orf88-207ENST00000478197 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 OGDHLQ9ULD0 1010 aa17.36■□□□□ 0.37
C2orf88-207ENST00000478197 DHX16O60231 1041 aaKnown RBP17.35■□□□□ 0.37
C2orf88-207ENST00000478197 SMARCA1P28370 1054 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 SLC1A4P43007 532 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 FXR1P51114 621 aaKnown RBP eCLIP17.35■□□□□ 0.37
C2orf88-207ENST00000478197 TROAPQ12815 778 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 APOA5Q6Q788 366 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 CLEC10AQ8IUN9 316 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 ZNF654Q8IZM8 581 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 BRF1Q92994 677 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
C2orf88-207ENST00000478197 RBM28Q9NW13 759 aaKnown RBP17.35■□□□□ 0.37
C2orf88-207ENST00000478197 NID2Q14112 1375 aa17.35■□□□□ 0.37
C2orf88-207ENST00000478197 ZBTB43O43298 467 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 FLOT1O75955 427 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 MFSD14CQ5VZR4 134 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 SLFN13Q68D06 897 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 FAM160B2Q86V87 743 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 SPICE1Q8N0Z3 855 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 MB21D1Q8N884 522 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 CTCFLQ8NI51 663 aaPredicted RBP17.34■□□□□ 0.37
C2orf88-207ENST00000478197 CHURC1Q8WUH1 139 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 C11orf49Q9H6J7 331 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 PLXNA1Q9UIW2 1896 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 PNMA2Q9UL42 364 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
C2orf88-207ENST00000478197 NDUFB10O96000 172 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 HOXC6P09630 235 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
C2orf88-207ENST00000478197 PDHBP11177 359 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 BMP3P12645 472 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 CCND3P30281 292 aaPredicted RBP17.33■□□□□ 0.36
C2orf88-207ENST00000478197 AK2P54819 239 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 TOB2Q14106 344 aaPredicted RBP17.33■□□□□ 0.36
C2orf88-207ENST00000478197 GRB14Q14449 540 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 KIAA1755Q5JYT7 1200 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
C2orf88-207ENST00000478197 MOV10L1Q9BXT6 1211 aaKnown RBP17.33■□□□□ 0.36
C2orf88-207ENST00000478197 SPATC1LQ9H0A9 340 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 RBM27Q9P2N5 1060 aaKnown RBP17.33■□□□□ 0.36
C2orf88-207ENST00000478197 FEM1BQ9UK73 627 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 TRIOBPQ9H2D6 2365 aa17.33■□□□□ 0.36
C2orf88-207ENST00000478197 KLF18A0A0U1RQI7 1052 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 STRNO43815 780 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 CPA1P15085 419 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 DSG3P32926 999 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 ZNF543Q08ER8 600 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 TRAF1Q13077 416 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 PLS1Q14651 629 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 LRRC47Q8N1G4 583 aaKnown RBP17.32■□□□□ 0.36
C2orf88-207ENST00000478197 FANCBQ8NB91 859 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 SHCBP1Q8NEM2 672 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 SNX21Q969T3 373 aa17.32■□□□□ 0.36
C2orf88-207ENST00000478197 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
C2orf88-207ENST00000478197 STAT2P52630 851 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 GRM4Q14833 912 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 DPP9Q86TI2 863 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 LRRC2Q9BYS8 371 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 MROH8Q9H579 483 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 FLRT1Q9NZU1 646 aa17.31■□□□□ 0.36
C2orf88-207ENST00000478197 PALM3A6NDB9 673 aaPredicted RBP17.3■□□□□ 0.36
C2orf88-207ENST00000478197 RAD21O60216 631 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 CDKL5O76039 1030 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 ERCC3P19447 782 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
C2orf88-207ENST00000478197 MNX1P50219 401 aaPredicted RBP17.3■□□□□ 0.36
C2orf88-207ENST00000478197 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 LHX8Q68G74 356 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
C2orf88-207ENST00000478197 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 PRPF38AQ8NAV1 312 aaKnown RBP17.3■□□□□ 0.36
C2orf88-207ENST00000478197 NPLOC4Q8TAT6 608 aa17.3■□□□□ 0.36
C2orf88-207ENST00000478197 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms