RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MINDY4BA8MYZ0 360 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 ARVCFO00192 962 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
CCM2-210ENST00000478169 FDX1P10109 184 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 GNAT2P19087 354 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 NKX3-2P78367 333 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 GNASQ5JWF2 1037 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 TMEM240Q5SV17 173 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 RASIP1Q5U651 963 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 C16orf59Q7L2K0 433 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 ZNF444Q8N0Y2 327 aaPredicted RBP11.53□□□□□ -0.56
CCM2-210ENST00000478169 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 VTI1AQ96AJ9 217 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 ECHDC1Q9NTX5 307 aa11.53□□□□□ -0.56
CCM2-210ENST00000478169 TTLL1O95922 423 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
CCM2-210ENST00000478169 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 TJAP1Q5JTD0 557 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 PSRC1Q6PGN9 363 aaPredicted RBP11.52□□□□□ -0.57
CCM2-210ENST00000478169 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 APPBP2Q92624 585 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 OSBP2Q969R2 916 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 FGD4Q96M96 766 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
CCM2-210ENST00000478169 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.57
CCM2-210ENST00000478169 MTMR4Q9NYA4 1195 aa11.52□□□□□ -0.57
CCM2-210ENST00000478169 RNF113AO15541 343 aaKnown RBP11.51□□□□□ -0.57
CCM2-210ENST00000478169 ADCY6O43306 1168 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 CSF2RAP15509 400 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
CCM2-210ENST00000478169 FAM126BQ8IXS8 530 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 CCDC144CPQ8IYA2 1237 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 STK11IPQ8N1F8 1099 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 CEP95Q96GE4 821 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 SEZ6LQ9BYH1 1024 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 PBX4Q9BYU1 374 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 KATNBL1Q9H079 304 aa11.51□□□□□ -0.57
CCM2-210ENST00000478169 ASB14A6NK59 587 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
CCM2-210ENST00000478169 CTAGE5O15320 804 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 GPAA1O43292 621 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
CCM2-210ENST00000478169 CABYRO75952 493 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 CD4P01730 458 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 BMP3P12645 472 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 TDO2P48775 406 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
CCM2-210ENST00000478169 TNFAIP2Q03169 654 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 ZNF365Q70YC5 407 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 FAM133AQ8N9E0 248 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 USP38Q8NB14 1042 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 SLC43A3Q8NBI5 491 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 CHURC1Q8WUH1 139 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 ATXN2LQ8WWM7 1075 aaKnown RBP11.5□□□□□ -0.57
CCM2-210ENST00000478169 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 GPATCH3Q96I76 525 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 MTIF3Q9H2K0 278 aaKnown RBP11.5□□□□□ -0.57
CCM2-210ENST00000478169 ACAD9Q9H845 621 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
CCM2-210ENST00000478169 IL23AQ9NPF7 189 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 PLIN4Q96Q06 1357 aa11.5□□□□□ -0.57
CCM2-210ENST00000478169 CHD9Q3L8U1 2897 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 GRXCR1A8MXD5 290 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 TNFRSF10AO00220 468 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 PRDM1O75626 825 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 APPP05067 770 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 PBX2P40425 430 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 STAT2P52630 851 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 CNTN2Q02246 1040 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 PDE4BQ07343 736 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 RAB30Q15771 203 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
CCM2-210ENST00000478169 TKFCQ3LXA3 575 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 PPP4R3BQ5MIZ7 849 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 FAM160B2Q86V87 743 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 MIER1Q8N108 512 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 LRRC47Q8N1G4 583 aaKnown RBP11.49□□□□□ -0.57
CCM2-210ENST00000478169 NACAP1Q9BZK3 213 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 PPP1R12CQ9BZL4 782 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 HOMER2Q9NSB8 354 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 MSRAQ9UJ68 235 aa11.49□□□□□ -0.57
CCM2-210ENST00000478169 GNEQ9Y223 722 aaKnown RBP11.49□□□□□ -0.57
CCM2-210ENST00000478169 ZEB2O60315 1214 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 PLA2G6O60733 806 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 FGBP02675 491 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
CCM2-210ENST00000478169 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
CCM2-210ENST00000478169 ACRP10323 421 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms