RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 MSL3P1P0C860 447 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 PRKCAP17252 672 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 GBP2P32456 591 aaPredicted RBP6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 ARSHQ5FYA8 562 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 RPTNQ6XPR3 784 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 LSRQ86X29 649 aaPredicted RBP6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 EAF1Q96JC9 268 aaPredicted RBP6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 GMIPQ9P107 970 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 SUSD2Q9UGT4 822 aa6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 GPR55Q9Y2T6 319 aaPredicted RBP6.49□□□□□ -1.37
NCKAP1-204ENST00000477988 SH3D21A4FU49 640 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 NOBOXO60393 691 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 ZNF20P17024 532 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 PFKLP17858 780 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 CNR2P34972 360 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 CCNFP41002 786 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 HTRA3P83110 453 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 SNW1Q13573 536 aaKnown RBP6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 NR1I3Q14994 352 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 TMC4Q7Z404 712 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 SAPCD2Q86UD0 394 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 TTC9BQ8N6N2 239 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 GOLM1Q8NBJ4 401 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 MRIQ9BWK5 157 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 CHST7Q9NS84 486 aa6.48□□□□□ -1.37
NCKAP1-204ENST00000477988 F6X3S4 739 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 ATE1O95260 518 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 FBLN1P23142 703 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 BMP8BP34820 402 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 MAPKAPK2P49137 400 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 CEBPAP49715 358 aaPredicted RBP6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 DLX2Q07687 328 aaPredicted RBP6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 CWF19L2Q2TBE0 894 aaKnown RBP6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 PLEKHN1Q494U1 663 aaPredicted RBP6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 FAM196AQ6ZSG2 479 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 Q8N1X5 172 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 LNPKQ9C0E8 428 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 PRDM14Q9GZV8 571 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 SLITRK6Q9H5Y7 841 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 ERVK13-1Q9NX77 482 aa6.47□□□□□ -1.37
NCKAP1-204ENST00000477988 ANKRD33BA6NCL7 494 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 ZNF205O95201 554 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 C6P13671 934 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 XPCQ01831 940 aaPredicted RBP6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 ZC3H14Q6PJT7 736 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 AEBP1Q8IUX7 1158 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 NUP43Q8NFH3 380 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 ZNF526Q8TF50 670 aaPredicted RBP6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 DDX1Q92499 740 aaKnown RBP6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 LRRC3Q9BY71 257 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
NCKAP1-204ENST00000477988 CLEC3AO75596 197 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 TACR2P21452 398 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 GARTP22102 1010 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 ACVRL1P37023 503 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 GDF5P43026 501 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 ZNF200P98182 395 aaPredicted RBP6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 FAM160A1Q05DH4 1040 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 TARBP2Q15633 366 aaKnown RBP6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 FBXO27Q8NI29 283 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 CNNM2Q9H8M5 875 aa6.45□□□□□ -1.38
NCKAP1-204ENST00000477988 CYR61O00622 381 aa6.44□□□□□ -1.38
NCKAP1-204ENST00000477988 FOXO4P98177 505 aa6.44□□□□□ -1.38
NCKAP1-204ENST00000477988 C8orf49Q96NF6 230 aa6.44□□□□□ -1.38
NCKAP1-204ENST00000477988 CDADC1Q9BWV3 514 aa6.44□□□□□ -1.38
NCKAP1-204ENST00000477988 KCNQ5Q9NR82 932 aa6.44□□□□□ -1.38
NCKAP1-204ENST00000477988 PCDHB14Q9Y5E9 798 aa6.44□□□□□ -1.38
NCKAP1-204ENST00000477988 ATF2P15336 505 aa6.43□□□□□ -1.38
NCKAP1-204ENST00000477988 VAV1P15498 845 aa6.43□□□□□ -1.38
NCKAP1-204ENST00000477988 EHMT1Q9H9B1 1298 aa6.43□□□□□ -1.38
NCKAP1-204ENST00000477988 IMPACTQ9P2X3 320 aa6.43□□□□□ -1.38
NCKAP1-204ENST00000477988 PMF1-BGLAPU3KQ54 211 aa6.43□□□□□ -1.38
NCKAP1-204ENST00000477988 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 OVOS1Q6IE37 1185 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 ATG4CQ96DT6 458 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 JMJD8Q96S16 334 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 BRMS1Q9HCU9 246 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 MINPP1Q9UNW1 487 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 PCDHB12Q9Y5F1 795 aa6.42□□□□□ -1.38
NCKAP1-204ENST00000477988 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 SORBS3O60504 671 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 CYBBP04839 570 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 POLR2BP30876 1174 aaKnown RBP6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 ITGAEP38570 1179 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 CTSKP43235 329 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 CRB2Q5IJ48 1285 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 HLA-DQA1Q5Y7H0 255 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 CRIP3Q6Q6R5 217 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 PAQR3Q6TCH7 311 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 NLRC3Q7RTR2 1065 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 CARFQ8N187 725 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 TMEM52Q8NDY8 209 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 AP5S1Q9NUS5 200 aa6.41□□□□□ -1.38
NCKAP1-204ENST00000477988 A0A1W2PQ27 194 aa6.4□□□□□ -1.38
NCKAP1-204ENST00000477988 A0A1W2PQ64 194 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms