RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
USP33-208ENST00000477949 DEFB123Q8N688 67 aa8.54□□□□□ -1.04
USP33-208ENST00000477949 THUMPD2Q9BTF0 503 aaKnown RBP8.54□□□□□ -1.04
USP33-208ENST00000477949 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
USP33-208ENST00000477949 DLG5Q8TDM6 1919 aa8.54□□□□□ -1.04
USP33-208ENST00000477949 HTATSF1O43719 755 aaKnown RBP8.53□□□□□ -1.04
USP33-208ENST00000477949 GHRHP01286 108 aa8.53□□□□□ -1.04
USP33-208ENST00000477949 IL22RA1Q8N6P7 574 aa8.53□□□□□ -1.04
USP33-208ENST00000477949 GDF15Q99988 308 aa8.53□□□□□ -1.04
USP33-208ENST00000477949 MXD3Q9BW11 206 aa8.53□□□□□ -1.04
USP33-208ENST00000477949 ARHGAP39Q9C0H5 1083 aa8.53□□□□□ -1.04
USP33-208ENST00000477949 RBSNQ9H1K0 784 aa8.53□□□□□ -1.04
USP33-208ENST00000477949 SRA1Q9HD15 236 aaKnown RBP8.53□□□□□ -1.04
USP33-208ENST00000477949 MMP20O60882 483 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 UFL1O94874 794 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 SASH1O94885 1247 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 ANXA1P04083 346 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 GJA8P48165 433 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 COX20Q5RI15 118 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 DACT2Q5SW24 774 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 GDF6Q6KF10 455 aaPredicted RBP8.52□□□□□ -1.05
USP33-208ENST00000477949 MAP4K3Q8IVH8 894 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 RTF1Q92541 710 aaKnown RBP8.52□□□□□ -1.05
USP33-208ENST00000477949 HTATIP2Q9BUP3 242 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
USP33-208ENST00000477949 STAP2Q9UGK3 403 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 TRMT112Q9UI30 125 aaKnown RBP8.52□□□□□ -1.05
USP33-208ENST00000477949 KCNMB2Q9Y691 235 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 ECM29Q5VYK3 1845 aa8.52□□□□□ -1.05
USP33-208ENST00000477949 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 ALX3O95076 343 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 GJB1P08034 283 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 HOXD8P13378 290 aaPredicted RBP8.51□□□□□ -1.05
USP33-208ENST00000477949 RFX1P22670 979 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 CTGFP29279 349 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 BMP8BP34820 402 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 SOX18P35713 384 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 LRIT3Q3SXY7 679 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 CACTIN-AS1Q8N1I8 211 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 BRI3BPQ8WY22 251 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 NR2E3Q9Y5X4 410 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 NCOR1O75376 2440 aa8.51□□□□□ -1.05
USP33-208ENST00000477949 BDP1A6H8Y1 2624 aa8.5□□□□□ -1.05
USP33-208ENST00000477949 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
USP33-208ENST00000477949 HSPA5P11021 654 aaKnown RBP8.5□□□□□ -1.05
USP33-208ENST00000477949 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
USP33-208ENST00000477949 APOBEC3FQ8IUX4 373 aaKnown RBP8.5□□□□□ -1.05
USP33-208ENST00000477949 FAM43AQ8N2R8 423 aa8.5□□□□□ -1.05
USP33-208ENST00000477949 ZNF428Q96B54 188 aa8.5□□□□□ -1.05
USP33-208ENST00000477949 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
USP33-208ENST00000477949 COL2A1P02458 1487 aaPredicted RBP8.5□□□□□ -1.05
USP33-208ENST00000477949 USP2O75604 605 aaPredicted RBP8.49□□□□□ -1.05
USP33-208ENST00000477949 LACTBP83111 547 aaPredicted RBP8.49□□□□□ -1.05
USP33-208ENST00000477949 SETDB1Q15047 1291 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 OTUD7BQ6GQQ9 843 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 FAM89AQ96GI7 184 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 GUCD1Q96NT3 240 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 NSUN5Q96P11 429 aaKnown RBP8.49□□□□□ -1.05
USP33-208ENST00000477949 ISCA1Q9BUE6 129 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 MUC3BQ9H195 1237 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 DEFB129Q9H1M3 183 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 AOX1Q06278 1338 aa8.49□□□□□ -1.05
USP33-208ENST00000477949 CACNA1GO43497 2377 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 FARP2O94887 1054 aaPredicted RBP8.48□□□□□ -1.05
USP33-208ENST00000477949 CCL5P13501 91 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 FSTP19883 344 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 BRD2P25440 801 aaKnown RBP8.48□□□□□ -1.05
USP33-208ENST00000477949 FKBP5Q13451 457 aaPredicted RBP8.48□□□□□ -1.05
USP33-208ENST00000477949 ARHGEF6Q15052 776 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
USP33-208ENST00000477949 CC2D1BQ5T0F9 858 aaKnown RBP8.48□□□□□ -1.05
USP33-208ENST00000477949 COPS6Q7L5N1 327 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
USP33-208ENST00000477949 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 MYO3BQ8WXR4 1341 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 MED23Q9ULK4 1368 aa8.48□□□□□ -1.05
USP33-208ENST00000477949 TLR2O60603 784 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 PRMT2P55345 433 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
USP33-208ENST00000477949 STRIP1Q5VSL9 837 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 U2AF1L4Q8WU68 220 aaKnown RBP8.47□□□□□ -1.05
USP33-208ENST00000477949 OPTNQ96CV9 577 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 PRIMPOLQ96LW4 560 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 KRTAP4-12Q9BQ66 201 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 PCMTD2Q9NV79 361 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 PPME1Q9Y570 386 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 PCDHAC2Q9Y5I4 1007 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 PPP2R3BQ9Y5P8 575 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 XDHP47989 1333 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 RPTORQ8N122 1335 aa8.47□□□□□ -1.05
USP33-208ENST00000477949 GRK4P32298 578 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 MMP14P50281 582 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.06
USP33-208ENST00000477949 ANKRD13AQ8IZ07 590 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms