RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 EPN1Q9Y6I3 576 aaPredicted RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 ABCC6O95255 1503 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 RTL9Q8NET4 1388 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 G3V3G9 751 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 NOP2P46087 812 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 PMS1P54277 932 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 ERVK-24P63145 666 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 UBE4AQ14139 1066 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 EZH2Q15910 746 aaKnown RBP10.94□□□□□ -0.66
CMC1-209ENST00000477739 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 C3orf67Q6ZVT6 689 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 MINPP1Q9UNW1 487 aa10.94□□□□□ -0.66
CMC1-209ENST00000477739 TMCO5BA8MYB1 307 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 RPN1P04843 607 aaKnown RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 APBA1Q02410 837 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 KLHL7Q8IXQ5 586 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 ENOX1Q8TC92 643 aaKnown RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 SPATA31A1Q5TZJ5 1347 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 ACTN4O43707 911 aaKnown RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 PARP1P09874 1014 aaKnown RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 TPTE2Q6XPS3 522 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 CEP112Q8N8E3 955 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 MMS19Q96T76 1030 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 SRPRBQ9Y5M8 271 aaKnown RBP10.93□□□□□ -0.66
CMC1-209ENST00000477739 GOLGA6L9A6NEM1 432 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 PLS1Q14651 629 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 CCDC70Q6NSX1 233 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 LRWD1Q9UFC0 647 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 HPSEQ9Y251 543 aa10.93□□□□□ -0.66
CMC1-209ENST00000477739 PSMA7O14818 248 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 MOCS3O95396 460 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 CYP2C19P33261 490 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 CCT5P48643 541 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 MAP3K9P80192 1104 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 MAP9Q49MG5 647 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 ODF2Q5BJF6 829 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 MAATS1Q7Z4T9 603 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 LRRC47Q8N1G4 583 aaKnown RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 UHMK1Q8TAS1 419 aaKnown RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 FOXP1Q9H334 677 aaPredicted RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 RNF40O75150 1001 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 CCDC40Q4G0X9 1142 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 NAA35Q5VZE5 725 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 CCDC47Q96A33 483 aaKnown RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 FAM84BQ96KN1 310 aaPredicted RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 TCP11L1Q9NUJ3 509 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 BSDC1Q9NW68 430 aaPredicted RBP10.92□□□□□ -0.66
CMC1-209ENST00000477739 PNPLA7Q6ZV29 1317 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 MYO1CO00159 1063 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 SNAP25P60880 206 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 CYP26C1Q6V0L0 522 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 RABGGTAQ92696 567 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 TMEM60Q9H2L4 133 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 RASSF4Q9H2L5 321 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 ABHD10Q9NUJ1 306 aa10.92□□□□□ -0.66
CMC1-209ENST00000477739 MECOMQ03112 1051 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 ZSCAN29Q8IWY8 852 aaPredicted RBP10.91□□□□□ -0.66
CMC1-209ENST00000477739 SH2D3CQ8N5H7 860 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 FUT8Q9BYC5 575 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 CCDC113Q9H0I3 377 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 TMEM51Q9NW97 253 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
CMC1-209ENST00000477739 LAMB4A4D0S4 1761 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 STK36Q9NRP7 1315 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 NKRFO15226 690 aaKnown RBP eCLIP10.91□□□□□ -0.66
CMC1-209ENST00000477739 FTCDO95954 541 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 RFC4P35249 363 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 COA7Q96BR5 231 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 MS4A14Q96JA4 679 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 LACRTQ9GZZ8 138 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 ACBD3Q9H3P7 528 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 RRP15Q9Y3B9 282 aaKnown RBP10.91□□□□□ -0.66
CMC1-209ENST00000477739 SAR1BQ9Y6B6 198 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 PCNTO95613 3336 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 LRRIQ3A6PVS8 624 aaPredicted RBP10.91□□□□□ -0.66
CMC1-209ENST00000477739 NDUFA10O95299 355 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 SCG2P13521 617 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 SLC16A2P36021 539 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 RBM5P52756 815 aaKnown RBP eCLIP10.91□□□□□ -0.66
CMC1-209ENST00000477739 NR1I3Q14994 352 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 CCDC93Q567U6 631 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 RNF26Q9BY78 433 aaPredicted RBP10.91□□□□□ -0.66
CMC1-209ENST00000477739 NYXQ9GZU5 481 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 TMEM260Q9NX78 707 aa10.91□□□□□ -0.66
CMC1-209ENST00000477739 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
CMC1-209ENST00000477739 THRAP3Q9Y2W1 955 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms