RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 PLEKHA8P1O95397 391 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 FMNL1O95466 1100 aaPredicted RBP15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 SLC25A27O95847 323 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 GNRH1P01148 92 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 ERCC3P19447 782 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 SMARCA1P28370 1054 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 COPB2P35606 906 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 GNAQP50148 359 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 AK2P54819 239 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 ARHGEF6Q15052 776 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 RTN1Q16799 776 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 CCDC174Q6PII3 467 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 MTMR8Q96EF0 704 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 MROH8Q9H579 483 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 VAT1LQ9HCJ6 419 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 RBM28Q9NW13 759 aaKnown RBP15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 NAP1L2Q9ULW6 460 aaPredicted RBP15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 RIPK3Q9Y572 518 aa15.35■□□□□ 0.05
EXOSC1-209ENST00000477692 SMCHD1A6NHR9 2005 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 TNPO2O14787 897 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 DHX16O60231 1041 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 ICAM1P05362 532 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 METAP2P50579 478 aaKnown RBP eCLIP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 PPP2R5BQ15173 497 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 ANKRD1Q15327 319 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 CDC37Q16543 378 aaPredicted RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 OTOP1Q7RTM1 612 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 PLEKHH3Q7Z736 793 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 NCAPG2Q86XI2 1143 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 SRBD1Q8N5C6 995 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 AGBL1Q96MI9 1066 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 FAM217BQ9NTX9 383 aaPredicted RBP15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 TRIM17Q9Y577 477 aa15.34■□□□□ 0.05
EXOSC1-209ENST00000477692 ZNF236Q9UL36 1845 aa15.33■□□□□ 0.05
EXOSC1-209ENST00000477692 ZNFX1Q9P2E3 1918 aaKnown RBP15.33■□□□□ 0.05
EXOSC1-209ENST00000477692 CDC27P30260 824 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 RABEP1Q15276 862 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 QRICH1Q2TAL8 776 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 TKFCQ3LXA3 575 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 COA7Q96BR5 231 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 SRRDQ9UH36 339 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 PNMA2Q9UL42 364 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 CCPG1Q9ULG6 757 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 BAZ2BQ9UIF8 2168 aaKnown RBP15.33■□□□□ 0.04
EXOSC1-209ENST00000477692 CCDC196A0A1B0GTZ2 297 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 ZBTB5O15062 677 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 PTPREP23469 700 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 HOXD10P28358 340 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 SLC4A3P48751 1232 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 PRMT2P55345 433 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 FUT2Q10981 343 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 WDR78Q5VTH9 848 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 CHST13Q8NET6 341 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 PIGSQ96S52 555 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 GJD2Q9UKL4 321 aa15.32■□□□□ 0.04
EXOSC1-209ENST00000477692 SLC15A5A6NIM6 579 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 STRNO43815 780 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 ALAS1P13196 640 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 TAL1P17542 331 aaPredicted RBP15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 ADD1P35611 737 aaKnown RBP15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 PRKCZQ05513 592 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 GRB14Q14449 540 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 MORN1Q5T089 497 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 IL27Q8NEV9 243 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 RNF146Q9NTX7 359 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 GABRQQ9UN88 632 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 IVNS1ABPQ9Y6Y0 642 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 RBBP6Q7Z6E9 1792 aaKnown RBP15.31■□□□□ 0.04
EXOSC1-209ENST00000477692 PNMA6FA0A0J9YX94 578 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 PFKFB2O60825 505 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 NTRK3Q16288 839 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 FBXO11Q86XK2 927 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 ABRAQ8N0Z2 381 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 CCDC82Q8N4S0 544 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 USP6NLQ92738 828 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 RRP36Q96EU6 259 aaKnown RBP15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 NUDT12Q9BQG2 462 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 AMNQ9BXJ7 453 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 ACAD9Q9H845 621 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 HOMER2Q9NSB8 354 aa15.3■□□□□ 0.04
EXOSC1-209ENST00000477692 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms