RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 RASGRP4Q8TDF6 673 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.18
PRPF39-203ENST00000477626 CNOT7Q9UIV1 285 aaKnown RBP13.9□□□□□ -0.18
PRPF39-203ENST00000477626 TRIM29Q14134 588 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 KCTD1Q719H9 257 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 LENG9Q96B70 501 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
PRPF39-203ENST00000477626 RASA3Q14644 834 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 NCAPHQ15003 741 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 TTC38Q5R3I4 469 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-203ENST00000477626 MMTAG2Q9BU76 263 aaKnown RBP13.89□□□□□ -0.19
PRPF39-203ENST00000477626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRPF39-203ENST00000477626 KIAA1217Q5T5P2 1943 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 IGSF22Q8N9C0 903 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
PRPF39-203ENST00000477626 POTECB2RU33 542 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 ME1P48163 572 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 PIK3AP1Q6ZUJ8 805 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 REPS2Q8NFH8 660 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 SIP14410 1827 aa13.89□□□□□ -0.19
PRPF39-203ENST00000477626 CTAGE5O15320 804 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRPF39-203ENST00000477626 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 PTGDRQ13258 359 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 STK38Q15208 465 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 KIF4BQ2VIQ3 1234 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 PPP4R3AQ6IN85 833 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 KRBA2Q6ZNG9 492 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 CCDC148Q8NFR7 591 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 KIAA1468Q9P260 1216 aa13.88□□□□□ -0.19
PRPF39-203ENST00000477626 FOXN1O15353 648 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 TRIM75PA6NK02 468 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 SLC16A2P36021 539 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 SPIRE1Q08AE8 756 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 CAMK4Q16566 473 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 HAS1Q92839 578 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 XBP1P17861 261 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 COA7Q96BR5 231 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 C12orf42Q96LP6 360 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-203ENST00000477626 PPP2R3BQ9Y5P8 575 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 RPTORQ8N122 1335 aa13.87□□□□□ -0.19
PRPF39-203ENST00000477626 SMCO2A6NFE2 343 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 RBM26Q5T8P6 1007 aaKnown RBP13.86□□□□□ -0.19
PRPF39-203ENST00000477626 EPSTI1Q96J88 318 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 WDR18Q9BV38 432 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 LAD1O00515 517 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 BMP15O95972 392 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 HEATR3Q7Z4Q2 680 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 KCNMB3Q9NPA1 279 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 KCNH3Q9ULD8 1083 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 PRR12Q9ULL5 1215 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 SLC37A4O43826 429 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 CTNND1O60716 968 aaKnown RBP13.86□□□□□ -0.19
PRPF39-203ENST00000477626 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 SAFBQ15424 915 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRPF39-203ENST00000477626 CDC37Q16543 378 aaPredicted RBP13.86□□□□□ -0.19
PRPF39-203ENST00000477626 CBX8Q9HC52 389 aa13.86□□□□□ -0.19
PRPF39-203ENST00000477626 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
PRPF39-203ENST00000477626 NLRP5P59047 1200 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 NBPF12Q5TAG4 269 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-203ENST00000477626 CNNM4Q6P4Q7 775 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 PLA2G4DQ86XP0 818 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 GPCPD1Q9NPB8 672 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 DOCK5Q9H7D0 1870 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 EPS15P42566 896 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 DPYDQ12882 1025 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 CKAP2LQ8IYA6 745 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
PRPF39-203ENST00000477626 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 TRPM7Q96QT4 1865 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRPF39-203ENST00000477626 MORC3Q14149 939 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 SARM1Q6SZW1 724 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 MOXD1Q6UVY6 613 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 KRT25Q7Z3Z0 450 aa13.85□□□□□ -0.19
PRPF39-203ENST00000477626 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
PRPF39-203ENST00000477626 MOGSQ13724 837 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 ZNF174Q15697 407 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 INF2Q27J81 1249 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 HYIQ5T013 277 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 SYDE2Q5VT97 1194 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 B3GNT9Q6UX72 402 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.84□□□□□ -0.196e-6■■■■■ 27.5
PRPF39-203ENST00000477626 ETNPPLQ8TBG4 499 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 FAM200AQ8TCP9 573 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 BICD2Q8TD16 824 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 CLEC4DQ8WXI8 215 aa13.84□□□□□ -0.19
PRPF39-203ENST00000477626 KLRG1Q96E93 195 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms