RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
VPS45-207ENST00000477558 ZNF831Q5JPB2 1677 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 FAM221AA4D161 298 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 USP11P51784 963 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 DDX10Q13206 875 aaKnown RBP6.99□□□□□ -1.29
VPS45-207ENST00000477558 TTLL4Q14679 1199 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 PPM1JQ5JR12 505 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 FAM196AQ6ZSG2 479 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 NPM2Q86SE8 214 aaKnown RBP6.99□□□□□ -1.29
VPS45-207ENST00000477558 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 LTV1Q96GA3 475 aaPredicted RBP6.99□□□□□ -1.29
VPS45-207ENST00000477558 HIF3AQ9Y2N7 669 aa6.99□□□□□ -1.29
VPS45-207ENST00000477558 SIPA1L3O60292 1781 aaPredicted RBP6.99□□□□□ -1.29
VPS45-207ENST00000477558 SCO2A0A1W2PP80 73 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 GFRA2O00451 464 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 PPM1GO15355 546 aaPredicted RBP6.98□□□□□ -1.29
VPS45-207ENST00000477558 CYP27B1O15528 508 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 GREM1O60565 184 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 RING1Q06587 406 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 RALBP1Q15311 655 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 WIPI1Q5MNZ9 446 aaPredicted RBP6.98□□□□□ -1.29
VPS45-207ENST00000477558 CYFIP1Q7L576 1253 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
VPS45-207ENST00000477558 GATAD2BQ8WXI9 593 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 ELMO3Q96BJ8 720 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 KCNF1Q9H3M0 494 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 KCNQ5Q9NR82 932 aa6.98□□□□□ -1.29
VPS45-207ENST00000477558 PCDH11XQ9BZA7 1347 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 PCDH11YQ9BZA8 1340 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 KDM6AO15550 1401 aaPredicted RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 QSER1Q2KHR3 1735 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 EXOC5O00471 708 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 TLR3O15455 904 aaKnown RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 DHX15O43143 795 aaKnown RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 CILPO75339 1184 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 NEFMP07197 916 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 NFICP08651 508 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 HCLS1P14317 486 aaPredicted RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 RAB6AP20340 208 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 MAP4P27816 1152 aaKnown RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 ERVK-24P63145 666 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 RAPGEF4Q8WZA2 1011 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 EAF1Q96JC9 268 aaPredicted RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 SPON2Q9BUD6 331 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 ATXN3LQ9H3M9 355 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 PRKRIP1Q9H875 184 aaPredicted RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 LGR6Q9HBX8 967 aa6.97□□□□□ -1.29
VPS45-207ENST00000477558 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 MYBBP1AQ9BQG0 1328 aaKnown RBP6.97□□□□□ -1.29
VPS45-207ENST00000477558 TAF1LQ8IZX4 1826 aa6.96□□□□□ -1.29
VPS45-207ENST00000477558 DLG5Q8TDM6 1919 aa6.96□□□□□ -1.29
VPS45-207ENST00000477558 DIAPH1O60610 1272 aaKnown RBP6.96□□□□□ -1.3
VPS45-207ENST00000477558 RNGTTO60942 597 aaKnown RBP6.96□□□□□ -1.3
VPS45-207ENST00000477558 CRKP46108 304 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 HNRNPUQ00839 825 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS45-207ENST00000477558 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
VPS45-207ENST00000477558 PRR23CQ6ZRP0 262 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 BEND4Q6ZU67 534 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 HDXQ7Z353 690 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 ZNF654Q8IZM8 581 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 UBP1Q9NZI7 540 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
VPS45-207ENST00000477558 SNCAIPQ9Y6H5 919 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 UBR2Q8IWV8 1755 aa6.96□□□□□ -1.3
VPS45-207ENST00000477558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.95□□□□□ -1.3
VPS45-207ENST00000477558 HMX2A2RU54 273 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 PRAMEF27A3QJZ7 478 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 ERCC5P28715 1186 aaPredicted RBP6.95□□□□□ -1.3
VPS45-207ENST00000477558 NTF4P34130 210 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 PTF1AQ7RTS3 328 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 UBE3DQ7Z6J8 389 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 KIAA0825Q8IV33 1275 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 RNF214Q8ND24 703 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 ACBD3Q9H3P7 528 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 SEMA6CQ9H3T2 930 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 PICK1Q9NRD5 415 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 RAXQ9Y2V3 346 aa6.95□□□□□ -1.3
VPS45-207ENST00000477558 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 COL5A3P25940 1745 aaPredicted RBP6.94□□□□□ -1.3
VPS45-207ENST00000477558 DYNC1LI2O43237 492 aaPredicted RBP6.94□□□□□ -1.3
VPS45-207ENST00000477558 PHKG2P15735 406 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 NFKBIBQ15653 356 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 ZBTB37Q5TC79 503 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 SULT6B1Q6IMI4 303 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 SMYD4Q8IYR2 804 aaPredicted RBP6.94□□□□□ -1.3
VPS45-207ENST00000477558 EZH1Q92800 747 aaPredicted RBP6.94□□□□□ -1.3
VPS45-207ENST00000477558 ISL2Q96A47 359 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 CAMKK2Q96RR4 588 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 FAM83CQ9BQN1 747 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 C7orf69Q9H7B7 122 aa6.94□□□□□ -1.3
VPS45-207ENST00000477558 PIDD1Q9HB75 910 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms