RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 HLFQ16534 295 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 NCAPH2Q6IBW4 605 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 KIAA1328Q86T90 577 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 JAKMIP2Q96AA8 810 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 SHISA4Q96DD7 197 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 YY1AP1Q9H869 796 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZC3H4Q9UPT8 1303 aaKnown RBP15.16■□□□□ 0.02
HLA-DMA-208ENST00000477541 MAGEB6P1A0A0J9YX57 407 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 ORC4O43929 436 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 HERVK_113P62684 666 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 COBLL1Q53SF7 1204 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCNI2Q6ZMN8 369 aaPredicted RBP15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 CCDC155Q8N6L0 562 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNF784Q8NCA9 323 aaPredicted RBP15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 FAM184BQ9ULE4 1060 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 V9GY48 417 aaPredicted RBP15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 THSD7AQ9UPZ6 1657 aa15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 ATXN2Q99700 1313 aaKnown RBP15.15■□□□□ 0.02
HLA-DMA-208ENST00000477541 A0A087WUV0 522 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 FAM205CA6NFA0 338 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 GOLGA8KD6RF30 607 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 TRIM66O15016 1216 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 RHOBTB3O94955 611 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 SCG2P13521 617 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 GPTP24298 496 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 TNFRSF8P28908 595 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 STAT6P42226 847 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 PRCPP42785 496 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 PFKFB3Q16875 520 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 EARS2Q5JPH6 523 aaKnown RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 IRF2BP1Q8IU81 584 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 TRIM58Q8NG06 486 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 CHP1Q99653 195 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 TTYH3Q9C0H2 523 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 DISC1Q9NRI5 854 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 EXOC1Q9NV70 894 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 CACNA1SQ13698 1873 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 A0A1B0GUL6 1792 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 RNF225M0QZC1 329 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 OPA1O60313 960 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 ATP1A1P05023 1023 aaKnown RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 CYP19A1P11511 503 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 CYP7A1P22680 504 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 KIF5BP33176 963 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 PRPHP41219 470 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 ARHGAP27Q6ZUM4 889 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 GIMAP8Q8ND71 665 aaPredicted RBP15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 MMS19Q96T76 1030 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 MTRQ99707 1265 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 CCSER1Q9C0I3 900 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 SPON1Q9HCB6 807 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 JRKLQ9Y4A0 524 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 ABCB11O95342 1321 aa15.14■□□□□ 0.01
HLA-DMA-208ENST00000477541 MYH1P12882 1939 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 USO1O60763 962 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 EPB41P11171 864 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 CASP1P29466 404 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 VAV2P52735 878 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 NLRP5P59047 1200 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 PPFIA1Q13136 1202 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 NNTQ13423 1086 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 CCDC152Q4G0S7 254 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 PARP10Q53GL7 1025 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 ICE2Q659A1 982 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 WDR59Q6PJI9 974 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 SPATS2Q86XZ4 545 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 CMTR1Q8N1G2 835 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 SYNE4Q8N205 404 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 CAGE1Q8TC20 777 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 AENQ8WTP8 325 aaKnown RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 ERGIC2Q96RQ1 377 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 BLZF1Q9H2G9 400 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 PPP1R1BQ9UD71 204 aaPredicted RBP15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 MAST2Q6P0Q8 1798 aa15.13■□□□□ 0.01
HLA-DMA-208ENST00000477541 PLEKHA8P1O95397 391 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 APBA1Q02410 837 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 KIF5AQ12840 1032 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 FAM182BQ5T319 152 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 ALS2CLQ60I27 953 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 SUGP1Q8IWZ8 645 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 DAGLBQ8NCG7 672 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 AK8Q96MA6 479 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 SELENOOQ9BVL4 669 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 CICQ96RK0 1608 aaPredicted RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 BCL9O00512 1426 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 GOLGA6BA6NDN3 693 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 KCNQ2O43526 872 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms