RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 ORC3Q9UBD5 711 aaPredicted RBP18.74■□□□□ 0.59
VHL-203ENST00000477538 SEC63Q9UGP8 760 aaKnown RBP18.74■□□□□ 0.59
VHL-203ENST00000477538 ADAMTS5Q9UNA0 930 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 DOCK3Q8IZD9 2030 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 PLXNB2O15031 1838 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 VWA5AO00534 786 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 ZBTB5O15062 677 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 ZBED4O75132 1171 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 CYP2C8P10632 490 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 HMGN5P82970 282 aaKnown RBP18.73■□□□□ 0.59
VHL-203ENST00000477538 QRICH1Q2TAL8 776 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 LBX2Q6XYB7 198 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 SMCR8Q8TEV9 937 aaPredicted RBP18.73■□□□□ 0.59
VHL-203ENST00000477538 SLC38A10Q9HBR0 1119 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
VHL-203ENST00000477538 CTDP1Q9Y5B0 961 aaPredicted RBP18.73■□□□□ 0.59
VHL-203ENST00000477538 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
VHL-203ENST00000477538 DEXIO95424 95 aa18.72■□□□□ 0.59
VHL-203ENST00000477538 TAF1CQ15572 869 aaPredicted RBP18.72■□□□□ 0.59
VHL-203ENST00000477538 CCDC174Q6PII3 467 aa18.72■□□□□ 0.59
VHL-203ENST00000477538 MB21D1Q8N884 522 aa18.72■□□□□ 0.59
VHL-203ENST00000477538 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
VHL-203ENST00000477538 GTF3C2Q8WUA4 911 aaPredicted RBP18.72■□□□□ 0.59
VHL-203ENST00000477538 SCG2P13521 617 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 FDPSP14324 419 aaKnown RBP18.71■□□□□ 0.59
VHL-203ENST00000477538 GJB2P29033 226 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 SLC4A3P48751 1232 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 PKN1Q16512 942 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
VHL-203ENST00000477538 REPS2Q8NFH8 660 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
VHL-203ENST00000477538 PLXNA1Q9UIW2 1896 aa18.71■□□□□ 0.59
VHL-203ENST00000477538 ALDH1A1P00352 501 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 FBXO11Q86XK2 927 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 CPXCR1Q8N123 301 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 FAM184AQ8NB25 1140 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 WASF1Q92558 559 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 RAVER2Q9HCJ3 691 aaKnown RBP18.7■□□□□ 0.58
VHL-203ENST00000477538 MYH15Q9Y2K3 1946 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 ZNF536O15090 1300 aa18.7■□□□□ 0.58
VHL-203ENST00000477538 LCTP09848 1927 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 hCG_1984214I3L0E3 225 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 PPP1R11O60927 126 aaPredicted RBP18.69■□□□□ 0.58
VHL-203ENST00000477538 ICAM1P05362 532 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 GCLCP48506 637 aaPredicted RBP18.69■□□□□ 0.58
VHL-203ENST00000477538 OAZ1P54368 228 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 TMEM132BQ14DG7 1078 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 POTEEQ6S8J3 1075 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 HEATR3Q7Z4Q2 680 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 ZNF713Q8N859 430 aaPredicted RBP18.69■□□□□ 0.58
VHL-203ENST00000477538 GPKOWQ92917 476 aaPredicted RBP eCLIP18.69■□□□□ 0.58
VHL-203ENST00000477538 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 AMNQ9BXJ7 453 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
VHL-203ENST00000477538 RABGAP1Q9Y3P9 1069 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 KIF3AQ9Y496 699 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
VHL-203ENST00000477538 ATP2A1O14983 1001 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 PEX10O60683 326 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 CNMDO75829 334 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 PLS1Q14651 629 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 USH1GQ495M9 461 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 AGBL1Q96MI9 1066 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 ALG1Q9BT22 464 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 ZFYVE28Q9HCC9 887 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 TXNRD2Q9NNW7 524 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 RBPJLQ9UBG7 517 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 PNMA2Q9UL42 364 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 CCPG1Q9ULG6 757 aa18.68■□□□□ 0.58
VHL-203ENST00000477538 MYH7BA7E2Y1 1941 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 CA12O43570 354 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 TAL1P17542 331 aaPredicted RBP18.67■□□□□ 0.58
VHL-203ENST00000477538 TRAF1Q13077 416 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 CRHR2Q13324 411 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 SNRNP48Q6IEG0 339 aaKnown RBP18.67■□□□□ 0.58
VHL-203ENST00000477538 ANKRD13CQ8N6S4 541 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 COA7Q96BR5 231 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 TEX13BQ9BXU2 312 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 BARHL2Q9NY43 387 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 PCDHA1Q9Y5I3 950 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 ABCB11O95342 1321 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 ZSWIM8A7E2V4 1837 aa18.67■□□□□ 0.58
VHL-203ENST00000477538 STXBP3O00186 592 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 TLR2O60603 784 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 ALAS1P13196 640 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 STAT3P40763 770 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 FOSBP53539 338 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 NAPAP54920 295 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 ERVK-9P63128 1117 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 ERVK-24P63145 666 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 IPO9Q96P70 1041 aaKnown RBP18.66■□□□□ 0.58
VHL-203ENST00000477538 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 VPS54Q9P1Q0 977 aa18.66■□□□□ 0.58
VHL-203ENST00000477538 XBP1P17861 261 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
VHL-203ENST00000477538 TYW1BQ6NUM6 668 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms