RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 MAGEA10P43363 369 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-204ENST00000477531 LRRC41Q15345 812 aa18.53■□□□□ 0.56
CLDN11-204ENST00000477531 MAMDC4Q6UXC1 1216 aa18.53■□□□□ 0.56
CLDN11-204ENST00000477531 LBHD1Q9BQE6 289 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-204ENST00000477531 FAM184BQ9ULE4 1060 aa18.53■□□□□ 0.56
CLDN11-204ENST00000477531 TACC3Q9Y6A5 838 aa18.53■□□□□ 0.56
CLDN11-204ENST00000477531 POTEB2H3BUK9 544 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 ZNF865P0CJ78 1059 aaPredicted RBP18.52■□□□□ 0.56
CLDN11-204ENST00000477531 TAL1P17542 331 aaPredicted RBP18.52■□□□□ 0.56
CLDN11-204ENST00000477531 NOVP48745 357 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 NT5C2P49902 561 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 RTP1P59025 263 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 CCDC174Q6PII3 467 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 ESR2Q92731 530 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 TTC14Q96N46 770 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 TRERF1Q96PN7 1200 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
CLDN11-204ENST00000477531 RNF146Q9NTX7 359 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 ZHX1Q9UKY1 873 aaPredicted RBP18.52■□□□□ 0.56
CLDN11-204ENST00000477531 PRR12Q9ULL5 1215 aa18.52■□□□□ 0.56
CLDN11-204ENST00000477531 PLXNA1Q9UIW2 1896 aa18.52■□□□□ 0.55
CLDN11-204ENST00000477531 ALAS1P13196 640 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 ADCYAP1R1P41586 468 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 SLC39A5Q6ZMH5 540 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 AGBL1Q96MI9 1066 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 ABHD16BQ9H3Z7 469 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 ATP11BQ9Y2G3 1177 aa18.51■□□□□ 0.55
CLDN11-204ENST00000477531 SNAI1O95863 264 aaPredicted RBP18.5■□□□□ 0.55
CLDN11-204ENST00000477531 PGK1P00558 417 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 ACVR2BQ13705 512 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 FERMT2Q96AC1 680 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.5■□□□□ 0.55
CLDN11-204ENST00000477531 CTNNA3Q9UI47 895 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 SMCHD1A6NHR9 2005 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 DNAH12Q6ZR08 3092 aa18.5■□□□□ 0.55
CLDN11-204ENST00000477531 MDM2Q00987 491 aaPredicted RBP18.49■□□□□ 0.55
CLDN11-204ENST00000477531 IMMTQ16891 758 aaKnown RBP18.49■□□□□ 0.55
CLDN11-204ENST00000477531 SYDE2Q5VT97 1194 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 IQCA1Q86XH1 822 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 TBC1D10CQ8IV04 446 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 DSCC1Q9BVC3 393 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 SPC25Q9HBM1 224 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 ZNF536O15090 1300 aa18.49■□□□□ 0.55
CLDN11-204ENST00000477531 ASB14A6NK59 587 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 SNAP25P60880 206 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 BTNL9Q6UXG8 535 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 ARMCX2Q7L311 632 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 TDHQ8IZJ6 230 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 TSEN34Q9BSV6 310 aaKnown RBP18.48■□□□□ 0.55
CLDN11-204ENST00000477531 GPCPD1Q9NPB8 672 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 A1CFQ9NQ94 594 aaKnown RBP18.48■□□□□ 0.55
CLDN11-204ENST00000477531 PHF24Q9UPV7 400 aa18.48■□□□□ 0.55
CLDN11-204ENST00000477531 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
CLDN11-204ENST00000477531 DUSP11O75319 330 aaKnown RBP18.47■□□□□ 0.55
CLDN11-204ENST00000477531 ICAM1P05362 532 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 SLC16A2P36021 539 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 IRX6P78412 446 aaPredicted RBP18.47■□□□□ 0.55
CLDN11-204ENST00000477531 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 RASGRP2Q7LDG7 609 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 CCDC144CPQ8IYA2 1237 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 FAM133AQ8N9E0 248 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
CLDN11-204ENST00000477531 RANBP17Q9H2T7 1088 aaKnown RBP18.47■□□□□ 0.55
CLDN11-204ENST00000477531 PDHBP11177 359 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 CCDC144BQ3MJ40 725 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 TRIM60Q495X7 471 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 NSMFQ6X4W1 530 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 DGKHQ86XP1 1220 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 RUFY2Q8WXA3 655 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
CLDN11-204ENST00000477531 NEDD4P46934 1319 aa18.46■□□□□ 0.55
CLDN11-204ENST00000477531 MOXD2PA6NHM9 499 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 ZNF543Q08ER8 600 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 SNX17Q15036 470 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 GPATCH4Q5T3I0 446 aaKnown RBP18.45■□□□□ 0.54
CLDN11-204ENST00000477531 TTC22Q5TAA0 569 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 C1orf53Q5VUE5 145 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
CLDN11-204ENST00000477531 PCSK9Q8NBP7 692 aaKnown RBP18.45■□□□□ 0.54
CLDN11-204ENST00000477531 LENG1Q96BZ8 264 aaPredicted RBP18.45■□□□□ 0.54
CLDN11-204ENST00000477531 FGD4Q96M96 766 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 ZKSCAN3Q9BRR0 538 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 KRT23Q9C075 422 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 SYNRGQ9UMZ2 1314 aa18.45■□□□□ 0.54
CLDN11-204ENST00000477531 A0A1W2PQ45 241 aaPredicted RBP18.44■□□□□ 0.54
CLDN11-204ENST00000477531 A0A1W2PQY0 241 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 B4E1Z4 1266 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 KDM4AO75164 1064 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 C6orf222P0C671 652 aaPredicted RBP18.44■□□□□ 0.54
CLDN11-204ENST00000477531 MUM1L1Q5H9M0 696 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 KLHDC9Q8NEP7 349 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 VTI1AQ96AJ9 217 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 KAT14Q9H8E8 782 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 CNNM2Q9H8M5 875 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms